RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CBFA2T3O75081 653 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 SMC2O95347 1197 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 SEMA4FO95754 770 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 CER1O95813 267 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 MOCS2O96007 188 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 DNTTP04053 509 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 DLDP09622 509 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 ATXN1LP0C7T5 689 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 POLR2EP19388 210 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 TBXAS1P24557 533 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 SLC11A2P49281 568 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 HNRNPDQ14103 355 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCDC40Q4G0X9 1142 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM133BQ5BKY9 247 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 KCNT1Q5JUK3 1230 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 PRAMEF14Q5SWL7 426 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 PIK3R6Q5UE93 754 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 NADSYN1Q6IA69 706 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 LCLAT1Q6UWP7 414 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 ARHGEF19Q8IW93 802 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 MFN1Q8IWA4 741 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 DHX40Q8IX18 779 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 CFAP52Q8N1V2 620 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 CARNMT1Q8N4J0 409 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 RHBDD1Q8TEB9 315 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 WFIKKN2Q8TEU8 576 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 ADAMTS14Q8WXS8 1223 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 BIRC7Q96CA5 298 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 PRICKLE1Q96MT3 831 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 GSDMAQ96QA5 445 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 BTBD1Q9H0C5 482 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 TM9SF3Q9HD45 589 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 ST7Q9NRC1 585 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 STOML2Q9UJZ1 356 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 NAALADL1Q9UQQ1 740 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 APOBEC2Q9Y235 224 aaKnown RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 BTBD3Q9Y2F9 522 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 PLXNB3Q9ULL4 1909 aa8.95□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM149AA5PLN7 773 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 BIN1O00499 593 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 PSMA7O14818 248 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 ACSL4O60488 711 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 IGLV3-27P01718 113 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 LTFP02788 710 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 FYNP06241 537 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 ATP5BP06576 529 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 PAEPP09466 180 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 CSKP41240 450 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 CTSOP43234 321 aaPredicted RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 AFF3P51826 1226 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZNF445P59923 1031 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 LRRC63Q05C16 580 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 COL9A2Q14055 689 aaPredicted RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 E2F5Q15329 346 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 CNGA2Q16280 664 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 FSCBQ5H9T9 825 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 MSANTD2Q6P1R3 559 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 IL27RAQ6UWB1 636 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 CCNI2Q6ZMN8 369 aaPredicted RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 KIAA0907Q7Z7F0 614 aaPredicted RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 PROSER1Q86XN7 944 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 UNC45BQ8IWX7 931 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 SCUBE3Q8IX30 993 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 ENGASEQ8NFI3 743 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 MDM1Q8TC05 714 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 DQX1Q8TE96 717 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 GOLGA1Q92805 767 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM149B1Q96BN6 582 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 NUCKS1Q9H1E3 243 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 FBXL12Q9NXK8 326 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 SERGEFQ9UGK8 458 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 XPO7Q9UIA9 1087 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 MAN1B1Q9UKM7 699 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 INTS6Q9UL03 887 aaKnown RBP8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 KIAA1257Q9ULG3 409 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 ANKRD6Q9Y2G4 727 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 NFE2L3Q9Y4A8 694 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 TMEM131Q92545 1883 aa8.94□□□□□ -0.98
CTDNEP1-203ENST00000570385 A0A1W2PP55 124 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 FAM221BA6H8Z2 402 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 TTC34A8MYJ7 566 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 H0Y8X5 98 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 MID1O15344 667 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SIN3BO75182 1162 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 LATS1O95835 1130 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 CAPNS1P04632 268 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 KRT5P13647 590 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 STX17P56962 302 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 ST8SIA6P61647 398 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 CDH18Q13634 790 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 TEAD4Q15561 434 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 TTC31Q49AM3 519 aaPredicted RBP8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 COBLL1Q53SF7 1204 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 DCAF6Q58WW2 860 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 SYPL2Q5VXT5 272 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 NUGGCQ68CJ6 796 aa8.93□□□□□ -0.98
CTDNEP1-203ENST00000570385 ZNF776Q68DI1 518 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms