RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 EHHADHQ08426 723 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF699Q32M78 642 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 LINC00303Q3SY05 128 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 SLC45A4Q5BKX6 768 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 MBLAC2Q68D91 279 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 ATG14Q6ZNE5 492 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 CCDC186Q7Z3E2 898 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 MFSD2AQ8NA29 543 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 HPS3Q969F9 1004 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 MYO19Q96H55 970 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 DEPDC7Q96QD5 511 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 CLIC5Q9NZA1 410 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 USP3Q9Y6I4 520 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 RP1P56715 2156 aa10.9□□□□□ -0.66
CTDNEP1-202ENST00000570380 TGFB1I1O43294 461 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 SUV39H1O43463 412 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 PHACTR2O75167 634 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 SIN3BO75182 1162 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 RNASEH2AO75792 299 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 PABPC1P11940 636 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 GP1BBP13224 206 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 ITGB6P18564 788 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 CASP4P49662 377 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 CST6Q15828 149 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 RRAGBQ5VZM2 374 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 IGF2-ASQ6U949 168 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 CCDC81Q6ZN84 652 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 AHI1Q8N157 1196 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 WFDC5Q8TCV5 224 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 SLC46A1Q96NT5 459 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 CDK5RAP1Q96SZ6 601 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 PNPLA8Q9NP80 782 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 IGSF5Q9NSI5 407 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 STARD5Q9NSY2 213 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 MARCH2Q9P0N8 246 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 CCDC39Q9UFE4 941 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 GGA2Q9UJY4 613 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 FZD4Q9ULV1 537 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 SATB2Q9UPW6 733 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 MYO9AB2RTY4 2548 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 SPTAN1Q13813 2472 aaKnown RBP10.89□□□□□ -0.67
CTDNEP1-202ENST00000570380 A0A1B0GVM2 712 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 SLC12A8A0AV02 714 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLIC2O15247 247 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 EFSO43281 561 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 LATO43561 262 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLSTN1O94985 981 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 ATP5BP06576 529 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 MYF5P13349 255 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 POLR2EP19388 210 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 SLC8A1P32418 973 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CD70P32970 193 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CYP2J2P51589 502 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 ADPRHP54922 357 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 PPP2CBP62714 309 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 PPP2CAP67775 309 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 ARL13BQ3SXY8 428 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 C3orf38Q5JPI3 329 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 NAPEPLDQ6IQ20 393 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 TMC6Q7Z403 805 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 AADATQ8N5Z0 425 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 PLEKHO2Q8TD55 490 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 PRR11Q96HE9 360 aaPredicted RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 TWNKQ96RR1 684 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 TEP1Q99973 2627 aaKnown RBP10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 OMDQ99983 421 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 OSBPL2Q9H1P3 480 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 CAAP1Q9H8G2 361 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 AGPAT3Q9NRZ7 376 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
CTDNEP1-202ENST00000570380 UTP20O75691 2785 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 LZTS3O60299 673 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 VNN1O95497 513 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 BMP15O95972 392 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 AFPP02771 609 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 CKMT1AP12532 417 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 DGKAP23743 735 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 RBMS1P29558 406 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 SGSHP51688 502 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 ASIC1P78348 528 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLN3Q13286 438 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 BIRC3Q13489 604 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 NCOA4Q13772 614 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 UBAP2LQ14157 1087 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 TRIP4Q15650 581 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 ISXQ2M1V0 245 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 HNRNPA1L2Q32P51 320 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 C9orf64Q5T6V5 341 aa10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTDNEP1-202ENST00000570380 UNC93AQ86WB7 457 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms