RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 ZRSR2Q15696 482 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TMCO4Q5TGY1 634 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 DLK2Q6UY11 383 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 C4orf50Q6ZRC1 276 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 PAQR9Q6ZVX9 377 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CCDC185Q8N715 623 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 ZBTB9Q96C00 473 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CFAP36Q96G28 342 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 NSL1Q96IY1 281 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SERAC1Q96JX3 654 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 MED10Q9BTT4 135 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 DNAJC28Q9NX36 388 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SCN1AP35498 2009 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 GOLGA8MH3BSY2 632 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 RNF103O00237 685 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TREHO43280 583 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CELF2O95319 508 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SPRP35270 261 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SERPINB5P36952 375 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 MNAT1P51948 309 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TAF1CQ15572 869 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TEX44Q53QW1 395 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 NAPEPLDQ6IQ20 393 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 E2F7Q96AV8 911 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 OXNAD1Q96HP4 312 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 RMDN2Q96LZ7 410 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 IL22Q9GZX6 179 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CDHR5Q9HBB8 845 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 WDR6Q9NNW5 1121 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 DMAP1Q9NPF5 467 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SAE1Q9UBE0 346 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 DNAJB4Q9UDY4 337 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 AAR2Q9Y312 384 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 HEY1Q9Y5J3 304 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CDY2AQ9Y6F7 541 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 MAGEC1O60732 1142 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 APRTP07741 180 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SLC2A3P11169 496 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 VAV1P15498 845 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 ADRA1DP25100 572 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TKTP29401 623 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TKTL1P51854 596 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 FCGRTP55899 365 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 TPI1P60174 286 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 OCRLQ01968 901 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SOX4Q06945 474 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SLC10A2Q12908 348 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 UGP2Q16851 508 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 SH2D4BQ5SQS7 431 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 KCTD11Q693B1 232 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 MSANTD2Q6P1R3 559 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 IFNL1Q8IU54 200 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CRLF3Q8IUI8 442 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 LMNTD2Q8IXW0 634 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 FUBP3Q96I24 572 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 ZNF668Q96K58 619 aaPredicted RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 RANBP9Q96S59 729 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 CATSPERBQ9H7T0 1116 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 KRT82Q9NSB4 513 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 DDX43Q9NXZ2 648 aaKnown RBP8.09□□□□□ -1.11
LINC00559-201ENST00000569476 BFARQ9NZS9 450 aa8.09□□□□□ -1.11
LINC00559-201ENST00000569476 PTPRDP23468 1912 aa8.09□□□□□ -1.12
LINC00559-201ENST00000569476 MFSD11O43934 449 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 EOMESO95936 686 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 KCNA4P22459 653 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
LINC00559-201ENST00000569476 MAGEA11P43364 429 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 KPNA2P52292 529 aaKnown RBP8.08□□□□□ -1.12
LINC00559-201ENST00000569476 DNAL1Q4LDG9 190 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 FAM133BQ5BKY9 247 aaKnown RBP8.08□□□□□ -1.12
LINC00559-201ENST00000569476 PACS1Q6VY07 963 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 DSTYKQ6XUX3 929 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 PPM1NQ8N819 430 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 ZBTB10Q96DT7 871 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 PTCD3Q96EY7 689 aaKnown RBP8.08□□□□□ -1.12
LINC00559-201ENST00000569476 P2RY11Q96G91 374 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 SUSD3Q96L08 255 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 C1orf74Q96LT6 269 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 PLAC1Q9HBJ0 212 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 GPATCH2LQ9NWQ4 482 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.08□□□□□ -1.12
LINC00559-201ENST00000569476 EP400Q96L91 3159 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 CCDC189A1A4V9 331 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 M0QYT0 321 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 AP1G2O75843 785 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 ANXA9O76027 345 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 KLHL2O95198 593 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 METTL18O95568 372 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 PYGBP11216 843 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 CYP2B6P20813 491 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 AMPD1P23109 780 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 LMO2P25791 158 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 TM4SF4P48230 202 aa8.08□□□□□ -1.12
LINC00559-201ENST00000569476 GBE1Q04446 702 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms