RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SRP68Q9UHB9 627 aaKnown RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 VPS51Q9UID3 782 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 FBXO9Q9UK97 447 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 AMFRQ9UKV5 643 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 RPS6KL1Q9Y6S9 549 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 DICER1Q9UPY3 1922 aaKnown RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 COL3A1P02461 1466 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 A0A1W2PP64 1363 aa3.9□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRRT4C9JH25 899 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PSMD9O00233 223 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PIP5K1CO60331 668 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 NBNO60934 754 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 CELA2AP08217 269 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 MYL3P08590 195 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 MYCLP12524 364 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 HTR7P34969 479 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 HALP42357 657 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 DIO1P49895 249 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 TUBA4AP68366 448 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMF1P82094 1093 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 DEUP1Q05D60 604 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 LMAN2Q12907 356 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 XRRA1Q6P2D8 792 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 MTHFD1LQ6UB35 978 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PTCHD4Q6ZW05 846 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 VGLL2Q8N8G2 317 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 ANKRD42Q8N9B4 389 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PNLDC1Q8NA58 520 aaKnown RBP3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 ATP11CQ8NB49 1132 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 IQCDQ96DY2 449 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 DAZAP1Q96EP5 407 aaKnown RBP3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 COG3Q96JB2 828 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 RITA1Q96K30 269 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 MMS19Q96T76 1030 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMX4Q9H1E5 349 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM83DQ9H4H8 585 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PLCB1Q9NQ66 1216 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 MAP3K20Q9NYL2 800 aaKnown RBP3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 LZTS1Q9Y250 596 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 HPSEQ9Y251 543 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLC27A6Q9Y2P4 619 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCNTO95613 3336 aa3.9□□□□□ -1.79
HMGB1P6-201ENST00000569046 ROCK2O75116 1388 aaKnown RBP3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 DLEC1Q9Y238 1755 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 H7C1Q1 480 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 ADAMTS3O15072 1205 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 INMTO95050 263 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 CYP2D6P10635 497 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 GYS1P13807 737 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 CREB1P16220 341 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 FGFR2P21802 821 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 MPGP29372 298 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 STT3AP46977 705 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 MTHFSP49914 203 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 LBX1P52954 281 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLC10A2Q12908 348 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 GRM1Q13255 1194 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 AWAT1Q58HT5 328 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 CEP78Q5JTW2 689 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 WDR78Q5VTH9 848 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 CLEC9AQ6UXN8 241 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 SFTPA1Q8IWL2 248 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMTC2Q8N394 836 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 SDR16C5Q8N3Y7 309 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 PAF1Q8N7H5 531 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 SMCR8Q8TEV9 937 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 IPCEF1Q8WWN9 437 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 LRRC46Q96FV0 321 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 HIST1H2AAQ96QV6 131 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 SH2D3AQ9BRG2 576 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 FLRT1Q9NZU1 646 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 FNIP2Q9P278 1114 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 DNAJB11Q9UBS4 358 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 ANAPC4Q9UJX5 808 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 ANKRD31Q8N7Z5 1873 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 TJP1Q07157 1748 aa3.89□□□□□ -1.79
HMGB1P6-201ENST00000569046 EDC4Q6P2E9 1401 aaKnown RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 C10orf71Q711Q0 1435 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 FER1L6Q2WGJ9 1857 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ABHD14A-ACY1A0A1B0GW23 586 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 A0A1W2PPC4 97 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 CLCA1A8K7I4 914 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 FOXN3O00409 490 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 NCK2O43639 380 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 APEHP13798 732 aaKnown RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ATICP31939 592 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 RFC4P35249 363 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ABCG1P45844 678 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 COPB1P53618 953 aaKnown RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 COPAP53621 1224 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 SUMO2P61956 95 aaKnown RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 DDR1Q08345 913 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZKSCAN2Q63HK3 967 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 GRHL2Q6ISB3 625 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 CRTC1Q6UUV9 634 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCGF5Q86SE9 256 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 SRLQ86TD4 932 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms