RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FOXP3Q9BZS1 431 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 MTRRQ9UBK8 725 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 CHMP2BQ9UQN3 213 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 POC1B-GALNT4F8VUJ3 575 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 TBC1D4O60343 1298 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 PIAS1O75925 651 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 SOD2P04179 222 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 URODP06132 367 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 ATF6P18850 670 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 SERPINB6P35237 376 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 GLUD2P49448 558 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 SEMA3BQ13214 749 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 CCDC38Q502W7 563 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 BRMS1LQ5PSV4 323 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 ANKRD20A2Q5SQ80 823 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 C6orf118Q5T5N4 469 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 ANKRD20A1Q5TYW2 823 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 ANKRD20A3Q5VUR7 823 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 SLC8B1Q6J4K2 584 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 ZNF771Q7L3S4 317 aaPredicted RBP7.28□□□□□ -1.24
SMG1-215ENST00000568239 PID1Q7Z2X4 250 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 FBXO36Q8NEA4 188 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 TTC16Q8NEE8 873 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 EXOC4Q96A65 974 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 OLFM3Q96PB7 478 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 CLSTN3Q9BQT9 956 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 CCSER2Q9H7U1 834 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 MPP6Q9NZW5 540 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 KLHL8Q9P2G9 620 aaPredicted RBP7.28□□□□□ -1.24
SMG1-215ENST00000568239 CTNNAL1Q9UBT7 734 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 VANGL2Q9ULK5 521 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 TTLL3Q9Y4R7 772 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 PATJQ8NI35 1801 aa7.28□□□□□ -1.24
SMG1-215ENST00000568239 EXOC1LA0A1B0GW35 172 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SLC12A8A0AV02 714 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SLC38A8A6NNN8 435 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 HACD1B0YJ81 288 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 RNF103O00237 685 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 PRRG1O14668 218 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TLR5O60602 858 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 APOEP02649 317 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 EN2P19622 333 aaPredicted RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 SSTR1P30872 391 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 ELF1P32519 619 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TUFMP49411 452 aaKnown RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 NUMBP49757 651 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TUBP50607 506 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 IFI35P80217 286 aaPredicted RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 PAFAH1B3Q15102 231 aaKnown RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 C3orf62Q6ZUJ4 267 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 BEND5Q7L4P6 421 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 COLGALT1Q8NBJ5 622 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 C2orf15Q8WU43 125 aaKnown RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 ZNF689Q96CS4 500 aaPredicted RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 AGAP3Q96P47 875 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 PIH1D1Q9NWS0 290 aaKnown RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 ARHGEF38Q9NXL2 777 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SPG21Q9NZD8 308 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 RANBP2P49792 3224 aaKnown RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 A0A0A0MRY4 1105 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 KIAA0355O15063 1070 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 ALOX15BO15296 676 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 CHADO15335 359 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 GCATO75600 419 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SEC24AO95486 1093 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SPATA31D3P0C874 917 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 LAG3P18627 525 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 ALDH1A3P47895 512 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 KCNJ11Q14654 390 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 PPP2R5DQ14738 602 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SPATA31D4Q6ZUB0 917 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TFAP2DQ7Z6R9 452 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 ZNF354CQ86Y25 554 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SLC39A11Q8N1S5 342 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 ZNF461Q8TAF7 563 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SPATA13Q96N96 652 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TTC25Q96NG3 672 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 HAPLN3Q96S86 360 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 SELENOSQ9BQE4 189 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 CAPS2Q9BXY5 557 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 OXCT2Q9BYC2 517 aaPredicted RBP7.27□□□□□ -1.25
SMG1-215ENST00000568239 RABEP2Q9H5N1 569 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG1-215ENST00000568239 SLC12A6Q9UHW9 1150 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 TLR6Q9Y2C9 796 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 HS3ST4Q9Y661 456 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 CEP290O15078 2479 aa7.27□□□□□ -1.25
SMG1-215ENST00000568239 A0A087WUV0 522 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 C5orf60A6NFR6 353 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ERICH4A6NGS2 130 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 KCNU1A8MYU2 1149 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 E9PAM4 449 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 EFCAB14O75071 495 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 IVLP07476 585 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 SLC2A3P11169 496 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 MX2P20592 715 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ELK3P41970 407 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms