RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 MS4A13Q5J8X5 152 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 DCAF12L1Q5VU92 463 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 CIR1Q86X95 450 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 AHI1Q8N157 1196 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 MINDY1Q8N5J2 469 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 MLKLQ8NB16 471 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 HJURPQ8NCD3 748 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 C1orf131Q8NDD1 294 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 SNX19Q92543 992 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 SLC39A13Q96H72 371 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 CPXM1Q96SM3 734 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 CAPN10Q9HC96 672 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 USP36Q9P275 1121 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 TLR6Q9Y2C9 796 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 SPAARA0A1B0GVQ0 90 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 FOXN3O00409 490 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 SART1O43290 800 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 APOEP02649 317 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 DLDP09622 509 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 CSKP41240 450 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 DPP6P42658 865 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 RING1Q06587 406 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 WDR45BQ5MNZ6 344 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 SYCP2LQ5T4T6 812 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 OR6B2Q6IFH4 312 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 KIAA0907Q7Z7F0 614 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 DEFB106AQ8N104 65 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 CEP76Q8TAP6 659 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 STK32AQ8WU08 396 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 SHC3Q92529 594 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 PPP1R13BQ96KQ4 1090 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 FAM204AQ9H8W3 233 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 POPDC2Q9HBU9 364 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 PRSS16Q9NQE7 514 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 EIF2B4Q9UI10 523 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 INTS6Q9UL03 887 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 SLCO1B1Q9Y6L6 691 aa12.67□□□□□ -0.38
GTF3C1-208ENST00000567843 TYW5A2RUC4 315 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 H0Y626 953 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 IRAK2O43187 625 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 ATP5BP06576 529 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CSRP1P21291 193 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 TACR2P21452 398 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 ACSL1P33121 698 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 HOXD12P35452 270 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CLCN1P35523 988 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 GGCXP38435 758 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 RPS14P62263 151 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CDH18Q13634 790 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 RAPGEF1Q13905 1077 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 MAN2A1Q16706 1144 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 FAM183BPQ6ZVS7 135 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 SLC47A2Q86VL8 602 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 APCDD1Q8J025 514 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 HDDC3Q8N4P3 179 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 FIBINQ8TAL6 211 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 RNF34Q969K3 372 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 AZIN2Q96A70 460 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 LMLNQ96KR4 655 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 DDX50Q9BQ39 737 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 THAP9Q9H5L6 903 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 C6orf106Q9H6K1 298 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 SAMSN1Q9NSI8 373 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CEP83Q9Y592 693 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 TNRC6BQ9UPQ9 1833 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 IGF2RP11717 2491 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 PLXND1Q9Y4D7 1925 aa12.66□□□□□ -0.38
GTF3C1-208ENST00000567843 CEP192Q8TEP8 1941 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 TTC34A8MYJ7 566 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 OPHN1O60890 802 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 KRT37O76014 449 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 ERBB2P04626 1255 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 GNSP15586 552 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 OXTRP30559 389 aa12.65□□□□□ -0.38
GTF3C1-208ENST00000567843 KRT9P35527 623 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms