RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SLC39A5Q6ZMH5 540 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 ZNF813Q6ZN06 617 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 CPOQ8IVL8 374 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 WIPF2Q8TF74 440 aaPredicted RBP5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 CELF1Q92879 486 aaKnown RBP5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 ATP2A3Q93084 1043 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 ZG16BQ96DA0 208 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 KTI12Q96EK9 354 aaPredicted RBP5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 EFHD1Q9BUP0 239 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 BRD8Q9H0E9 1235 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 SLC22A11Q9NSA0 550 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 SPATA31A5Q5VU36 1347 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 SPATA31A7Q8IWB4 1347 aa5.42□□□□□ -1.54
SHCBP1-206ENST00000567698 C3orf70A6NLC5 250 aaPredicted RBP5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 TMEM232C9JQI7 657 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 IRAK2O43187 625 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 TFRCP02786 760 aaKnown RBP5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 RCAN1P53805 252 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 ACTR2P61160 394 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 SHC2P98077 582 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 PDCLQ13371 301 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 RPS6KA2Q15349 733 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 FAM110CQ1W6H9 321 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 ZNF569Q5MCW4 686 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 HERVK_113Q902F9 699 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 RUBCNQ92622 972 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 UBXN10Q96LJ8 280 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 SCLT1Q96NL6 688 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 NUAK2Q9H093 628 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 PLEKHA2Q9HB19 425 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 RASSF1Q9NS23 344 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
SHCBP1-206ENST00000567698 MASP2O00187 686 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 KRT38O76015 456 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 CNTN5O94779 1100 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 CSF1P09603 554 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 ACP5P13686 325 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 VPS41P49754 854 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 CEP78Q5JTW2 689 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 ZNF484Q5JVG2 852 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 MEX3CQ5U5Q3 659 aaKnown RBP5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 PTF1AQ7RTS3 328 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 CPXCR1Q8N123 301 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 AFG1LQ8WV93 481 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 MAP4K1Q92918 833 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 ZNF764Q96H86 408 aaPredicted RBP5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 C5orf34Q96MH7 638 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 FCRL5Q96RD9 977 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 SENP7Q9BQF6 1050 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 MTMR4Q9NYA4 1195 aa5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
SHCBP1-206ENST00000567698 TBC1D3DA0A087WVF3 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3IA0A087WXS9 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3EA0A087X179 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3KA0A087X1G2 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3BA6NDS4 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3FA6NER0 549 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3LB9A6J9 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 ALDOAP04075 364 aaKnown RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3HP0C7X1 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 CHN1P15882 459 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 CCT5P48643 541 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 YPEL5P62699 121 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 B4GALNT1Q00973 533 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 CFHR1Q03591 330 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 RNASELQ05823 741 aaKnown RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3GQ6DHY5 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3CQ6IPX1 549 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 MDGA2Q7Z553 956 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TBC1D3Q8IZP1 549 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 PTGR2Q8N8N7 351 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 EVI5LQ96CN4 794 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TWNKQ96RR1 684 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 ZNF347Q96SE7 839 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 RMI1Q9H9A7 625 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 CHODLQ9H9P2 273 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TXNRD2Q9NNW7 524 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 PDGFCQ9NRA1 345 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 ADARB2Q9NS39 739 aaKnown RBP5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 GGA3Q9NZ52 723 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 FLRT1Q9NZU1 646 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 GJD2Q9UKL4 321 aa5.39□□□□□ -1.55
SHCBP1-206ENST00000567698 TTC34A8MYJ7 566 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 GRM8O00222 908 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 SGPL1O95470 568 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 CNPP09543 421 aaKnown RBP5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 LYL1P12980 280 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 PRPH2P23942 346 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 AVPR2P30518 371 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 AARSP49588 968 aaKnown RBP eCLIP5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 MCM2P49736 904 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 CCR5P51681 352 aa5.38□□□□□ -1.55
SHCBP1-206ENST00000567698 SLC10A2Q12908 348 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms