RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 RFPL3O75679 317 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 FGF19O95750 216 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 THP07101 528 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 PABPC1P11940 636 aaKnown RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 GABRR2P28476 465 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 AVPR1AP37288 418 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 PRKCEQ02156 737 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 MAP4K2Q12851 820 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 PLD1Q13393 1074 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 SSPNQ14714 243 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 NR1I3Q14994 352 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 TESK1Q15569 626 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 NTRK3Q16288 839 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 TAF12Q16514 161 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 EOGTQ5NDL2 527 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 SRGAP1Q7Z6B7 1085 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 PLA2G4DQ86XP0 818 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 PTRH1Q86Y79 214 aaKnown RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 SMAP1Q8IYB5 467 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 ZCCHC9Q8N567 271 aaKnown RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 GSTCDQ8NEC7 633 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 EXTL1Q92935 676 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 CPB2Q96IY4 423 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 GCNAQ96QF7 691 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 SH2D3AQ9BRG2 576 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 ZNF577Q9BSK1 485 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 NXF3Q9H4D5 531 aaKnown RBP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 TASP1Q9H6P5 420 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 ECT2Q9H8V3 914 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
CNOT1-212ENST00000567285 TBX20Q9UMR3 447 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 NEDD4P46934 1319 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 KNTC1P50748 2209 aa6.9□□□□□ -1.3
CNOT1-212ENST00000567285 SPTBN1Q01082 2364 aaKnown RBP6.9□□□□□ -1.31
CNOT1-212ENST00000567285 C22orf46C9J442 243 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 K7EQS6 105 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 SGK1O00141 431 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 ABLIM1O14639 778 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 CYTH3O43739 400 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 MARCH6O60337 910 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PPFIA2O75334 1257 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 ZNF217O75362 1048 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 LDOC1O95751 146 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 C1SP09871 688 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 HNRNPLP14866 589 aaKnown RBP eCLIP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 MRPS21P82921 87 aaKnown RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 SSRP1Q08945 709 aaKnown RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 KCNAB2Q13303 367 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 SKIDA1Q1XH10 827 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 SLC35G1Q2M3R5 365 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 ZSCAN23Q3MJ62 389 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 SLC8B1Q6J4K2 584 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 KDM7AQ6ZMT4 941 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 IGDCC3Q8IVU1 814 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 LSMEM2Q8N112 164 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PANK1Q8TE04 598 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 MZB1Q8WU39 189 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PRPF31Q8WWY3 499 aaKnown RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 TBC1D22BQ9NU19 505 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 DUS2Q9NX74 493 aaKnown RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 CLCA2Q9UQC9 943 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PCDHGA1Q9Y5H4 931 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 TIMM13Q9Y5L4 95 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-212ENST00000567285 COL4A3BPQ9Y5P4 624 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 NPFFR2Q9Y5X5 522 aa6.89□□□□□ -1.31
CNOT1-212ENST00000567285 PCNX1Q96RV3 2341 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 PCDH15Q96QU1 1955 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 ESYT2A0FGR8 921 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 TCAF2A6NFQ2 919 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 DBX1A6NMT0 343 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 KCNK3O14649 394 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 BCAT2O15382 392 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-212ENST00000567285 NPTXRO95502 500 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 FAM153BP0C7A2 387 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 ITGB6P18564 788 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 CFPP27918 469 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 AXLP30530 894 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 DCTP40126 519 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 IFNAR2P48551 515 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
CNOT1-212ENST00000567285 DNAJC3Q13217 504 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 LINC00303Q3SY05 128 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 CTXN3Q4LDR2 81 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 GAREM2Q75VX8 874 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 DNAJB7Q7Z6W7 309 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-212ENST00000567285 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 TICAM1Q8IUC6 712 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 KRTAP1-3Q8IUG1 177 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 ATP2A3Q93084 1043 aa6.88□□□□□ -1.31
CNOT1-212ENST00000567285 ZNF669Q96BR6 464 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms