RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 FAM217AQ8IXS0 508 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 CPXM2Q8N436 756 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 CPA6Q8N4T0 437 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 ARFGAP1Q8N6T3 406 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 TPCN2Q8NHX9 752 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 DNASE1L2Q92874 299 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 IRF7Q92985 503 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 AZIN2Q96A70 460 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 CALR3Q96L12 384 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 PEBP4Q96S96 227 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 DDX50Q9BQ39 737 aaKnown RBP11.88□□□□□ -0.51
KARS-207ENST00000566560 FAM83CQ9BQN1 747 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 ANLNQ9NQW6 1124 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 TMPRSS4Q9NRS4 437 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 STOML2Q9UJZ1 356 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 USP18Q9UMW8 372 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.515e-9■□□□□ 9.8
KARS-207ENST00000566560 DUSP10Q9Y6W6 482 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
KARS-207ENST00000566560 TYW5A2RUC4 315 aaKnown RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 F5H5T6 163 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 I6L893 689 aaPredicted RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 SPOPO43791 374 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 TCF4P15884 667 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 TACR2P21452 398 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 SLC6A4P31645 630 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 CHKAP35790 457 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 AIF1P55008 147 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 PFKPQ01813 784 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 SLC25A11Q02978 314 aaKnown RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 SCAPQ12770 1279 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 SMTNL2Q2TAL5 461 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 LY6G5CQ5SRR4 150 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 SLFN11Q7Z7L1 901 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 PRICKLE1Q96MT3 831 aaPredicted RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 SNRNP25Q9BV90 132 aaKnown RBP11.87□□□□□ -0.51
KARS-207ENST00000566560 LINC00597Q9H2U6 94 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 GOLPH3Q9H4A6 298 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 ECT2Q9H8V3 914 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 LZTFL1Q9NQ48 299 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 GTSE1Q9NYZ3 720 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 PCSK1NQ9UHG2 260 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 MUTYHQ9UIF7 546 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 GUCA1BQ9UMX6 200 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 DOCK4Q8N1I0 1966 aa11.87□□□□□ -0.51
KARS-207ENST00000566560 UNC80Q8N2C7 3258 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 NEDD8-MDP1E9PL57 170 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 MOCS3O95396 460 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 CYBBP04839 570 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ADH5P11766 374 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 IL1R2P27930 398 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ADRA1BP35368 520 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 SLC1A1P43005 524 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 RUNX3Q13761 415 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 DHCR24Q15392 516 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
KARS-207ENST00000566560 ANO4Q32M45 955 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ITPRIPL2Q3MIP1 535 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 RFWD3Q6PCD5 774 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ZNF662Q6ZS27 426 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 CYP4V2Q6ZWL3 525 aaPredicted RBP11.86□□□□□ -0.51
KARS-207ENST00000566560 DAAM2Q86T65 1068 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
KARS-207ENST00000566560 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 BHMTQ93088 406 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 HAPLN3Q96S86 360 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 SIK2Q9H0K1 926 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
KARS-207ENST00000566560 GPATCH2LQ9NWQ4 482 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 VANGL2Q9ULK5 521 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 FZD10Q9ULW2 581 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 HYOU1Q9Y4L1 999 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 CAPN6Q9Y6Q1 641 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 F5P12259 2224 aa11.86□□□□□ -0.51
KARS-207ENST00000566560 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 OTOL1A6NHN0 477 aaPredicted RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 HOXC11O43248 304 aaPredicted RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 TSPAN3O60637 253 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 COMTP21964 271 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms