RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 E2F4Q16254 413 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 C9orf64Q5T6V5 341 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 NUGGCQ68CJ6 796 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CLEC17AQ6ZS10 378 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SPATS2Q86XZ4 545 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 XXYLT1Q8NBI6 393 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PIP4K2CQ8TBX8 421 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ERCC4Q92889 916 aaPredicted RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 JAKMIP2Q96AA8 810 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 UBR5O95071 2799 aaPredicted RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CCDC187A0A096LP49 1063 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CFAP69A5D8W1 941 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PP2D1A8MPX8 630 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SCAMP1O15126 338 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 TGFB1I1O43294 461 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ATP2C2O75185 946 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PPFIA2O75334 1257 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 LUC7L3O95232 432 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 DDAH2O95865 285 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 HARSP12081 509 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ITPKBP27987 946 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SLC6A4P31645 630 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 AMPD3Q01432 767 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CLN3Q13286 438 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SNRNP35Q16560 246 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 FAM46CQ5VWP2 391 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ATL3Q6DD88 541 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 KIAA1161Q6NSJ0 714 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 KIAA1324Q6UXG2 1013 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 DSG4Q86SJ6 1040 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 HJURPQ8NCD3 748 aaPredicted RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 OR5B17Q8NGF7 314 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 NAT6Q93015 286 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 AGPAT3Q9NRZ7 376 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 OSER1Q9NX31 292 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PCDHGA3Q9Y5H0 932 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 A0A1W2PQ27 194 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 A0A1W2PQ64 194 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 A0A1W2PQC6 194 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 TMEM110-MUSTN1A8MSY1 372 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 XPO1O14980 1071 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PPP6R2O75170 966 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 IGLV3-25P01717 112 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 KLKB1P03952 638 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SETSIPP0DME0 302 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PABPC1P11940 636 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CR2P20023 1033 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ACAT1P24752 427 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 TXLNAP40222 546 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 NASPP49321 788 aaPredicted RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ADPRHP54922 357 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 MCM6Q14566 821 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ELAVL3Q14576 367 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CST6Q15828 149 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ANO4Q32M45 955 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PRPF39Q86UA1 669 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 WDR36Q8NI36 951 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SPATA20Q8TB22 786 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 GLMNQ92990 594 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 WBP2Q969T9 261 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 PSMG3-AS1Q96PY0 264 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 MRPL44Q9H9J2 332 aaKnown RBP6.39□□□□□ -1.39
UBE3A-205ENST00000566215 CNGB3Q9NQW8 809 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 ABCC13Q9NSE7 274 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 SEPT3Q9UH03 358 aa6.39□□□□□ -1.39
UBE3A-205ENST00000566215 AKAP13Q12802 2813 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 GPR179Q6PRD1 2367 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 EME2A4GXA9 379 aaPredicted RBP6.38□□□□□ -1.39
UBE3A-205ENST00000566215 A8MXQ7 604 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 K7ELQ4 463 aaPredicted RBP6.38□□□□□ -1.39
UBE3A-205ENST00000566215 STX10O60499 249 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 AP1G2O75843 785 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 FBXO21O94952 628 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 DHX8Q14562 1220 aaKnown RBP6.38□□□□□ -1.39
UBE3A-205ENST00000566215 ISXQ2M1V0 245 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 ZNF667Q5HYK9 610 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 SDHAF4Q5VUM1 108 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 DHRS13Q6UX07 377 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 CHST9Q7L1S5 443 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 PARD3BQ8TEW8 1205 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 STK32AQ8WU08 396 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 ZNF516Q92618 1163 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 P2RY11Q96G91 374 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 SLC39A13Q96H72 371 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 SPAG5Q96R06 1193 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 FAM129BQ96TA1 746 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 FUCA2Q9BTY2 467 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 PDE11AQ9HCR9 933 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 TRAF3IP3Q9Y228 551 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 R3HCC1Q9Y3T6 440 aaKnown RBP6.38□□□□□ -1.39
UBE3A-205ENST00000566215 EP300Q09472 2414 aaPredicted RBP6.38□□□□□ -1.39
UBE3A-205ENST00000566215 SPEGQ15772 3267 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 NPHP3-ACAD11A0A0J9YXS1 232 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 PDXKO00764 312 aa6.38□□□□□ -1.39
UBE3A-205ENST00000566215 LIPCP11150 499 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms