RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SMIM23A6NLE4 172 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 H7C0C1 242 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 APOL1O14791 398 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 TBC1D4O60343 1298 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 GDF9O60383 454 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 AVILO75366 819 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 FBXO21O94952 628 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 ACSL3O95573 720 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 SRGAP2BP0DMP2 458 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 RAG1P15918 1043 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 MAPK1P28482 360 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 RDXP35241 583 aaKnown RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 ATP5OP48047 213 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 PMS2P54278 862 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 PSMA6P60900 246 aaKnown RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 YWHAGP61981 247 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD9-217ENST00000565832 ZNF844Q08AG5 666 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 FASTKD3Q14CZ7 662 aaKnown RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 MAPRE1Q15691 268 aaKnown RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 KYNUQ16719 465 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 MGAT5BQ3V5L5 792 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 CEP85LQ5SZL2 805 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 FAXCQ5TGI0 409 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 SLC9A4Q6AI14 798 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 DRICH1Q6PGQ1 229 aaPredicted RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 C4orf50Q6ZRC1 276 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 MREGQ8N565 214 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 EIF1ADQ8N9N8 165 aaKnown RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 TEKT4Q8WW24 435 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 RSAD2Q8WXG1 361 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 RNF34Q969K3 372 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 TTPALQ9BTX7 342 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 CEP41Q9BYV8 373 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 WDCPQ9H6R7 721 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 ZNF395Q9H8N7 513 aaPredicted RBP6.44□□□□□ -1.38
CHD9-217ENST00000565832 FAM204AQ9H8W3 233 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 ARHGEF4Q9NR80 690 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 WHRNQ9P202 907 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 FBXW11Q9UKB1 542 aa6.44□□□□□ -1.38
CHD9-217ENST00000565832 SF3B1O75533 1304 aaKnown RBP eCLIP6.44□□□□□ -1.384e-6■■■■■ 90.5
CHD9-217ENST00000565832 SHROOM3Q8TF72 1996 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 PRRC2BQ5JSZ5 2229 aaKnown RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 WDR27A2RRH5 827 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 MTMR11A4FU01 709 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 SYN3O14994 580 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 KCNN4O15554 427 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 SPATA31D3P0C874 917 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 TIMP2P16035 220 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 SLCO1A2P46721 670 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 NOMO1Q15155 1222 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 ALS2CLQ60I27 953 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 NCBP2-AS2Q69YL0 99 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 TTC19Q6DKK2 380 aaPredicted RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 HIBCHQ6NVY1 386 aaPredicted RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 KCNT2Q6UVM3 1135 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 SPATA31D4Q6ZUB0 917 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 DCP1BQ8IZD4 617 aaKnown RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 CYP4X1Q8N118 509 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 NUP93Q8N1F7 819 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 CCDC89Q8N998 374 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 CCDC110Q8TBZ0 833 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 FAM71BQ8TC56 605 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 DQX1Q8TE96 717 aaKnown RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 RNF139Q8WU17 664 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 FAF2Q96CS3 445 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 IGSF21Q96ID5 467 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 C9orf72Q96LT7 481 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 CLSTN3Q9BQT9 956 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 DTLQ9NZJ0 730 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 GMIPQ9P107 970 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 BCCIPQ9P287 314 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHD9-217ENST00000565832 OR12D3Q9UGF7 316 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 ADAM21Q9UKJ8 722 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 STAP1Q9ULZ2 295 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 MAGED2Q9UNF1 606 aaPredicted RBP6.43□□□□□ -1.38
CHD9-217ENST00000565832 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 TANC1Q9C0D5 1861 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 COL4A6Q14031 1691 aa6.43□□□□□ -1.38
CHD9-217ENST00000565832 TLDC2A0PJX2 215 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 MCF2LO15068 1137 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 SEC24AO95486 1093 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 MOCS2O96007 188 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 HSPA1AP0DMV8 641 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 HSPA1BP0DMV9 641 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 MPSTP25325 297 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 CXCR3P49682 368 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 CTCFP49711 727 aaPredicted RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 WDR5P61964 334 aaKnown RBP6.42□□□□□ -1.38
CHD9-217ENST00000565832 ROR1Q01973 937 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 LMNB2Q03252 620 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 TAF10Q12962 218 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 GPR17Q13304 367 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 TFDP2Q14188 446 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 HSP90B2PQ58FF3 399 aa6.42□□□□□ -1.38
CHD9-217ENST00000565832 COX20Q5RI15 118 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms