RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 FAM181AQ8N9Y4 354 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 GOLGA5Q8TBA6 731 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 SMARCD2Q92925 531 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 UTP4Q969X6 686 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ERLEC1Q96DZ1 483 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 MYRFLQ96LU7 910 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CGRRF1Q99675 332 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 SEMA4CQ9C0C4 833 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 PLEKHA5Q9HAU0 1116 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 SIX2Q9NPC8 291 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 IFNKQ9P0W0 207 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ARMCX3Q9UH62 379 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ADAMTS1Q9UHI8 967 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 NUB1Q9Y5A7 615 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 DOPEY1Q5JWR5 2465 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 SPTAN1Q13813 2472 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 FAM170AA1A519 330 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SMTNL1A8MU46 457 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PODXLO00592 558 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PRRG1O14668 218 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 MAPK13O15264 365 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SLC16A3O15427 465 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 ATP2C2O75185 946 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 KIF20AO95235 890 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 IL18RAPO95256 599 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 KRT19P08727 400 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 FTH1P19P0C7X4 201 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 CD59P13987 128 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 ACPPP15309 386 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SCP2P22307 547 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 LMO2P25791 158 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PON1P27169 355 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 TKTP29401 623 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PTGER3P43115 390 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 GALK1P51570 392 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 YARSP54577 528 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 CLDN6P56747 220 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 LILRA4P59901 499 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PPP2R3AQ06190 1150 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SERINC3Q13530 473 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 RAB33AQ14088 237 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 HSP90AA2PQ14568 343 aaPredicted RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SOWAHAQ2M3V2 549 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 VWA3BQ502W6 1294 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 COLEC12Q5KU26 742 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PMS2CLQ68D20 193 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 TRIM68Q6AZZ1 485 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 PDZD4Q76G19 769 aaPredicted RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 RRAGAQ7L523 313 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 ARID3BQ8IVW6 561 aaPredicted RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 RPLP0P6Q8NHW5 317 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 CHFRQ96EP1 664 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 TMEM209Q96SK2 561 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 NUSAP1Q9BXS6 441 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 GTPBP4Q9BZE4 634 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 TRIM4Q9C037 500 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 XPO4Q9C0E2 1151 aaKnown RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 NDST4Q9H3R1 872 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 ASB7Q9H672 318 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SMYD3Q9H7B4 428 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 C8orf33Q9H7E9 229 aaPredicted RBP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 CYP4F11Q9HBI6 524 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 KIAA1586Q9HCI6 787 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 ACP6Q9NPH0 428 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 LATS2Q9NRM7 1088 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 CEP72Q9P209 647 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 STK39Q9UEW8 545 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 SIK3Q9Y2K2 1263 aa6.52□□□□□ -1.37
UBFD1-204ENST00000565634 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBFD1-204ENST00000565634 NUP210Q8TEM1 1887 aaPredicted RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 COL5A1P20908 1838 aaPredicted RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 BECN2A8MW95 431 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 KIAA0391O15091 583 aaKnown RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 CHADO15335 359 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 B3GAT3O94766 335 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 VNN2O95498 520 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 AFPP02771 609 aaKnown RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 PDGFRBP09619 1106 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 KRT13P13646 458 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ITPKAP23677 461 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 LRPAP1P30533 357 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 HOXA9P31269 272 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ELF1P32519 619 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ABCD1P33897 745 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 PBX1P40424 430 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 PPP1R2P41236 205 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ABCG1P45844 678 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 ATXN3P54252 364 aaPredicted RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 TUSC3Q13454 348 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 LY6DQ14210 128 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 DMC1Q14565 340 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 CYP4A22Q5TCH4 519 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 WSCD1Q658N2 575 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 XKR5Q6UX68 686 aa6.51□□□□□ -1.37
UBFD1-204ENST00000565634 INTS8Q75QN2 995 aaKnown RBP6.51□□□□□ -1.37
UBFD1-204ENST00000565634 LIMS2Q7Z4I7 341 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms