RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 DNAJB4Q9UDY4 337 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PHIPQ8WWQ0 1821 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 SAC3D1A6NKF1 404 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SCAMP1O15126 338 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DDX3YO15523 660 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 IL18RAPO95256 599 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LCA5LO95447 670 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LGALS2P05162 132 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC2A4P14672 509 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CPT1AP50416 773 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 NDST1P52848 882 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TPD52P55327 224 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 OTUD4Q01804 1114 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 SGO2Q562F6 1265 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 IKBIPQ70UQ0 350 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TFAP2DQ7Z6R9 452 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DNAJB8Q8NHS0 232 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ATP6V1HQ9UI12 483 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RAB21Q9UL25 225 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 AK5Q9Y6K8 562 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 COL2A1P02458 1487 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLCO1B7G3V0H7 640 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 MT-CO1P00395 513 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TGM3Q08188 693 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 NAB1Q13506 487 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 EDRF1Q3B7T1 1238 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 INAVAQ3KP66 663 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FNBP1LQ5T0N5 605 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 MARCH8Q5T0T0 291 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DCUN1D2Q6PH85 259 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ARHGAP36Q6ZRI8 547 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 HDDC2Q7Z4H3 204 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 C1orf127Q8N9H9 656 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CSGALNACT1Q8TDX6 532 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 UCMAQ8WVF2 138 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 WDR60Q8WVS4 1066 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CDT1Q9H211 546 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 WDR70Q9NW82 654 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC13A4Q9UKG4 626 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF865P0CJ78 1059 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 GJA1P17302 382 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CTCFP49711 727 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 DMTNQ08495 405 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TMED1Q13445 227 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TFDP2Q14188 446 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZSWIM7Q19AV6 140 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ATF7IP2Q5U623 682 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SYPL2Q5VXT5 272 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 GDF6Q6KF10 455 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 MFSD7Q6UXD7 560 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 H2AFVQ71UI9 128 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 VSIG1Q86XK7 387 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FBXL13Q8NEE6 735 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TTC8Q8TAM2 541 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RSAD2Q8WXG1 361 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DCLK3Q9C098 648 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FAM192AQ9GZU8 254 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 AKAP7Q9P0M2 348 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 GHRLQ9UBU3 117 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SFMBT1Q9UHJ3 866 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CPSF3Q9UKF6 684 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF148Q9UQR1 794 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SNX5Q9Y5X3 404 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CFAP99D6REC4 459 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 KCNK1O00180 336 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ITGA10O75578 1167 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 C4BPAP04003 597 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 PABPC1P11940 636 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 AXLP30530 894 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 HSD17B3P37058 310 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DR1Q01658 176 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 GEN1Q17RS7 908 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF699Q32M78 642 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CCDC157Q569K6 752 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF280DQ6N043 979 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ANKS3Q6ZW76 656 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CCDC28BQ9BUN5 200 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC13A1Q9BZW2 595 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PABPC3Q9H361 631 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 RIBC2Q9H4K1 309 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF358Q9NW07 568 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 COPG2Q9UBF2 871 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 MAN1A2O60476 641 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SYN1P17600 705 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 STX1BP61266 288 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 POLR2LP62875 67 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 MSS51Q4VC12 460 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 IGDCC3Q8IVU1 814 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 NAT16Q8N8M0 369 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 GALNT6Q8NCL4 622 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FAM161BQ96MY7 647 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SERPINB12Q96P63 405 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 GAD1Q99259 594 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ASPSCR1Q9BZE9 553 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TRIM8Q9BZR9 551 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PLK2Q9NYY3 685 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 NUMBLQ9Y6R0 609 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms