RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MIS12Q9H081 205 aa24.82■■□□□ 1.56
NME3-206ENST00000564252 ZMIZ1Q9ULJ6 1067 aa24.82■■□□□ 1.56
NME3-206ENST00000564252 CNTN6Q9UQ52 1028 aa24.82■■□□□ 1.56
NME3-206ENST00000564252 NUMA1Q14980 2115 aa24.82■■□□□ 1.56
NME3-206ENST00000564252 BCAT2O15382 392 aaPredicted RBP24.81■■□□□ 1.56
NME3-206ENST00000564252 GPD2P43304 727 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 DQX1Q8TE96 717 aaKnown RBP24.81■■□□□ 1.56
NME3-206ENST00000564252 LMLNQ96KR4 655 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 FCRL2Q96LA5 508 aaPredicted RBP24.81■■□□□ 1.56
NME3-206ENST00000564252 PRICKLE1Q96MT3 831 aaPredicted RBP24.81■■□□□ 1.56
NME3-206ENST00000564252 PCED1AQ9H1Q7 454 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 FBRSQ9HAH7 460 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 PRSS16Q9NQE7 514 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 EIF2B4Q9UI10 523 aaKnown RBP24.81■■□□□ 1.56
NME3-206ENST00000564252 KLK13Q9UKR3 277 aa24.81■■□□□ 1.56
NME3-206ENST00000564252 H0Y626 953 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 BIN1O00499 593 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 TRIM16O95361 564 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 GNA14O95837 355 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 AFPP02771 609 aaKnown RBP24.8■■□□□ 1.56
NME3-206ENST00000564252 ATP5BP06576 529 aaKnown RBP24.8■■□□□ 1.56
NME3-206ENST00000564252 STX17P56962 302 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 BNC1Q01954 994 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 NAXDQ8IW45 347 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 SCUBE3Q8IX30 993 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 MYEOVQ96EZ4 313 aa24.8■■□□□ 1.56
NME3-206ENST00000564252 INTS2Q9H0H0 1204 aaKnown RBP24.8■■□□□ 1.56
NME3-206ENST00000564252 C6orf106Q9H6K1 298 aaPredicted RBP24.8■■□□□ 1.56
NME3-206ENST00000564252 TMEM8BA6NDV4 472 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 POLR2EP19388 210 aaKnown RBP24.79■■□□□ 1.56
NME3-206ENST00000564252 ACSL1P33121 698 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 RPS14P62263 151 aaKnown RBP24.79■■□□□ 1.56
NME3-206ENST00000564252 PAK1Q13153 545 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 NNTQ13423 1086 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 MFN1Q8IWA4 741 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 ZNF557Q8N988 423 aaPredicted RBP24.79■■□□□ 1.56
NME3-206ENST00000564252 HJURPQ8NCD3 748 aaPredicted RBP24.79■■□□□ 1.56
NME3-206ENST00000564252 FIBINQ8TAL6 211 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 SLC39A13Q96H72 371 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 SERPINB11Q96P15 392 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 STIM2Q9P246 746 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 NAALADL1Q9UQQ1 740 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 TLR6Q9Y2C9 796 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 MSRB2Q9Y3D2 182 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.79■■□□□ 1.56
NME3-206ENST00000564252 DMXL2Q8TDJ6 3036 aa24.79■■□□□ 1.56
NME3-206ENST00000564252 GADD45BO75293 160 aaPredicted RBP24.78■■□□□ 1.56
NME3-206ENST00000564252 ZBTB16Q05516 673 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 TRIP6Q15654 476 aaKnown RBP24.78■■□□□ 1.56
NME3-206ENST00000564252 ZNF423Q2M1K9 1284 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 TTC17Q96AE7 1141 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 MYO19Q96H55 970 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 SRRTQ9BXP5 876 aaKnown RBP24.78■■□□□ 1.56
NME3-206ENST00000564252 IL21RQ9HBE5 538 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 ST7Q9NRC1 585 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 SLCO1B1Q9Y6L6 691 aa24.78■■□□□ 1.56
NME3-206ENST00000564252 FREM2Q5SZK8 3169 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 SART1O43290 800 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 KRT5P13647 590 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 RDXP35241 583 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 ACADSBP45954 432 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 RPS24P62847 133 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 MEA1Q16626 185 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 DENND1BQ6P3S1 775 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 BEND5Q7L4P6 421 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 RAB44Q7Z6P3 723 aaPredicted RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 TAC4Q86UU9 113 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 CHCHD4Q8N4Q1 142 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 ADAM32Q8TC27 787 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 FAM149B1Q96BN6 582 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 DDX50Q9BQ39 737 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 SLC4A5Q9BY07 1137 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 NUCKS1Q9H1E3 243 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 GAREM1Q9H706 876 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 SUN2Q9UH99 717 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 CYTH4Q9UIA0 394 aa24.77■■□□□ 1.56
NME3-206ENST00000564252 INTS6Q9UL03 887 aaKnown RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.77■■□□□ 1.56
NME3-206ENST00000564252 FAM221BA6H8Z2 402 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 CER1O95813 267 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 DNTTP04053 509 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 ZNF883P0CG24 379 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 MATKP42679 507 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 MS4A13Q5J8X5 152 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 SYPL2Q5VXT5 272 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 IL27RAQ6UWB1 636 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 STK32AQ8WU08 396 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 SNX19Q92543 992 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 BTBD1Q9H0C5 482 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 MTG2Q9H4K7 406 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 UBE2TQ9NPD8 197 aaPredicted RBP24.76■■□□□ 1.55
NME3-206ENST00000564252 PCDHB9Q9Y5E1 797 aa24.76■■□□□ 1.55
NME3-206ENST00000564252 TYW5A2RUC4 315 aaKnown RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 PAPSS1O43252 624 aaPredicted RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 CBFA2T3O75081 653 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 SEMA4FO95754 770 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 CSKP41240 450 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 HLA-BQ31612 363 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 ZNF776Q68DI1 518 aaPredicted RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 CARNMT1Q8N4J0 409 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms