RNA–Protein interactions for RNA: ENST00000563844.1

CASC16-202, Transcript of cancer susceptibility 16, humanhuman

TSL 3 BASIC

Gene CASC16, Length 610 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-202ENST00000563844 SF3A3Q12874 501 aaKnown RBP eCLIP4.74□□□□□ -1.65
CASC16-202ENST00000563844 LAMB3Q13751 1172 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 PDCD2Q16342 344 aaPredicted RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 PXDC1Q5TGL8 231 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 FAM57BQ71RH2 274 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 OTUD7AQ8TE49 926 aaPredicted RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 LTV1Q96GA3 475 aaPredicted RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 DDX23Q9BUQ8 820 aaKnown RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 SLC29A3Q9BZD2 475 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 PABPC3Q9H361 631 aaKnown RBP4.74□□□□□ -1.65
CASC16-202ENST00000563844 CCDC134Q9H6E4 229 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 PRDM16Q9HAZ2 1276 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 B3GNT3Q9Y2A9 372 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 ZMYM2Q9UBW7 1377 aa4.74□□□□□ -1.65
CASC16-202ENST00000563844 hCG_1642624A0A1W2PR95 340 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 C2CD4BA6NLJ0 364 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 SLC38A8A6NNN8 435 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 PRPF4O43172 522 aaKnown RBP eCLIP4.73□□□□□ -1.65
CASC16-202ENST00000563844 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 RFPL3SP0C7P2 107 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 AKT1P31749 480 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 GRK5P34947 590 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 MCM2P49736 904 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 PLCD1P51178 756 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 ZNF81P51508 661 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 CCDC38Q502W7 563 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 TTC22Q5TAA0 569 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 CCDC117Q8IWD4 279 aaPredicted RBP4.73□□□□□ -1.65
CASC16-202ENST00000563844 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 OR52N4Q8NGI2 321 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 STT3BQ8TCJ2 826 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 CPT1BQ92523 772 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 TUBB6Q9BUF5 446 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 HTATIP2Q9BUP3 242 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 VPS16Q9H269 839 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 NDUFAF4Q9P032 175 aa4.73□□□□□ -1.65
CASC16-202ENST00000563844 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
CASC16-202ENST00000563844 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 F8W810 466 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 PPEF2O14830 753 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 CNTN5O94779 1100 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 LDHAP00338 332 aaKnown RBP4.72□□□□□ -1.65
CASC16-202ENST00000563844 TMEM191BP0C7N4 346 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 SLC37A1P57057 533 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 TAS2R50P59544 299 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 B4GALNT1Q00973 533 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 MTA1Q13330 715 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 ANXA2RQ3ZCQ2 193 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 ANKRD40Q6AI12 368 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 ERAP2Q6P179 960 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 GGT6Q6P531 493 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 SLC2A7Q6PXP3 512 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 PAQR4Q8N4S7 273 aaPredicted RBP4.72□□□□□ -1.65
CASC16-202ENST00000563844 SLC2A12Q8TD20 617 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 SDCCAG3Q96C92 435 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 CLMNQ96JQ2 1002 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 ZFYVE19Q96K21 471 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 TRMOQ9BU70 441 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 MLXIPLQ9NP71 852 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 PAPOLBQ9NRJ5 636 aaKnown RBP4.72□□□□□ -1.65
CASC16-202ENST00000563844 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 SLC12A4Q9UP95 1085 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 SCRIBQ14160 1630 aa4.72□□□□□ -1.65
CASC16-202ENST00000563844 TBC1D3DA0A087WVF3 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3IA0A087WXS9 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3EA0A087X179 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3KA0A087X1G2 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3BA6NDS4 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3FA6NER0 549 aaPredicted RBP4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3LB9A6J9 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3HP0C7X1 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
CASC16-202ENST00000563844 CPA2P48052 419 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 PNLIPRP1P54315 467 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 ZNF91Q05481 1191 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 Q4G0T1 1027 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 LIPMQ5VYY2 423 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3GQ6DHY5 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3CQ6IPX1 549 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 ANKRD13BQ86YJ7 626 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 RHPN2Q8IUC4 686 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 TBC1D3Q8IZP1 549 aaPredicted RBP4.71□□□□□ -1.66
CASC16-202ENST00000563844 EXD3Q8N9H8 876 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 OR1N1Q8NGS0 311 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
CASC16-202ENST00000563844 TRAPPC12Q8WVT3 735 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 IGFBPL1Q8WX77 278 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 MCRS1Q96EZ8 462 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 ZNF778Q96MU6 729 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 GPR78Q96P69 363 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 MAGEH1Q9H213 219 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 LRFN1Q9P244 771 aa4.71□□□□□ -1.66
CASC16-202ENST00000563844 CACNA1IQ9P0X4 2223 aa4.7□□□□□ -1.66
CASC16-202ENST00000563844 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
CASC16-202ENST00000563844 M0QYT0 321 aa4.7□□□□□ -1.66
CASC16-202ENST00000563844 HNRNPRO43390 633 aaKnown RBP4.7□□□□□ -1.66
CASC16-202ENST00000563844 TLX3O43711 291 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms