RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 NUP58Q9BVL2 599 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 TRIM6Q9C030 488 aaPredicted RBP4.97□□□□□ -1.61
CDR2-203ENST00000563573 NDST4Q9H3R1 872 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CHST12Q9NRB3 414 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 TAB2Q9NYJ8 693 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 TNFSF13BQ9Y275 285 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.97□□□□□ -1.614e-7■■■□□ 15.3
CDR2-203ENST00000563573 CDY2AQ9Y6F7 541 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 STYXL1Q9Y6J8 313 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 SQORQ9Y6N5 450 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 CITO14578 2027 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 GRIN2DO15399 1336 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 ADGRA3Q8IWK6 1321 aa4.97□□□□□ -1.61
CDR2-203ENST00000563573 A0A0B4J269 797 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 A0A1B0GUA9 196 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 GOLGA8IPA6NC78 632 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 GOLGA8JA6NMD2 632 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 NPIPB8E9PQR5 432 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 P4HA2O15460 535 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 AP5Z1O43299 807 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 N4BP1O75113 896 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 CSDE1O75534 798 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 AKAP3O75969 853 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 IL18RAPO95256 599 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 PARNO95453 639 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 HARSP12081 509 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 CKBP12277 381 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 TNNI1P19237 187 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 ADSSP30520 456 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SDHAP31040 664 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 GTF2H1P32780 548 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 DEKP35659 375 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 ADCY8P40145 1251 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CASP4P49662 377 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 VAMP7P51809 220 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 AP3M2P53677 418 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SESN2P58004 480 aaPredicted RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 CD83Q01151 205 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 MCL1Q07820 350 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 BFSP1Q12934 665 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 TRIM14Q14142 442 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 NOLC1Q14978 699 aaKnown RBP eCLIP4.96□□□□□ -1.62
CDR2-203ENST00000563573 SNRNP35Q16560 246 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 TRIM61Q5EBN2 209 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 DCAF17Q5H9S7 520 aaPredicted RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 KANK2Q63ZY3 851 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SPECC1LQ69YQ0 1117 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SLC27A1Q6PCB7 646 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 LRRC55Q6ZSA7 311 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 NECAB2Q7Z6G3 386 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 JAZF1Q86VZ6 243 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CD302Q8IX05 232 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 THNSL1Q8IYQ7 743 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SPC24Q8NBT2 197 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CCDC150Q8NCX0 1101 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 HIPK4Q8NE63 616 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 GSTCDQ8NEC7 633 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 E2F7Q96AV8 911 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 IQCDQ96DY2 449 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 SAAL1Q96ER3 474 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CCDC51Q96ER9 411 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CPB2Q96IY4 423 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 ACAP3Q96P50 834 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 MENTQ9BUN1 341 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 CCDC94Q9BW85 323 aaPredicted RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 TRPV6Q9H1D0 765 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 HSD3B7Q9H2F3 369 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 MMRN2Q9H8L6 949 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 MINDY3Q9H8M7 445 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 RPF1Q9H9Y2 349 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 TRMT13Q9NUP7 481 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 UCKL1Q9NWZ5 548 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 RBAKQ9NYW8 714 aaPredicted RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 PLA2G3Q9NZ20 509 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 ANKFY1Q9P2R3 1169 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 NDOR1Q9UHB4 597 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 ST3GAL5Q9UNP4 418 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 VWA7Q9Y334 891 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 NOC2LQ9Y3T9 749 aaKnown RBP4.96□□□□□ -1.62
CDR2-203ENST00000563573 CNTNAP2Q9UHC6 1331 aa4.96□□□□□ -1.62
CDR2-203ENST00000563573 BRCA2P51587 3418 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TRIP11Q15643 1979 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 SLC12A8A0AV02 714 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 GTPBP10A4D1E9 387 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 LGALS16A8MUM7 142 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TISP43B9A030 160 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 MATN2O00339 956 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 SCDO00767 359 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TEX33O43247 280 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 XPOTO43592 962 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 TSPAN1O60635 241 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PQBP1O60828 265 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 MPIG6BO95866 241 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TNNC2P02585 160 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 CHRNA1P02708 482 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 CLTAP09496 248 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 IQCF3P0C7M6 154 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 STAG3L1P0CL83 205 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 DLATP10515 647 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms