RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 USP30Q70CQ3 517 aa19.44■□□□□ 0.7
NME3-204ENST00000563498 ZC3H3Q8IXZ2 948 aaKnown RBP19.44■□□□□ 0.7
NME3-204ENST00000563498 HNRNPLLQ8WVV9 542 aaKnown RBP19.44■□□□□ 0.7
NME3-204ENST00000563498 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
NME3-204ENST00000563498 ORAI3Q9BRQ5 295 aa19.44■□□□□ 0.7
NME3-204ENST00000563498 RSPH9Q9H1X1 276 aaPredicted RBP19.44■□□□□ 0.7
NME3-204ENST00000563498 KIAA1257Q9ULG3 409 aa19.44■□□□□ 0.7
NME3-204ENST00000563498 TMEM131Q92545 1883 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 GOLGA8CPA6NN73 597 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 E9PAM4 449 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 H0Y8X5 98 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 CETN3O15182 167 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 MSI1O43347 362 aaKnown RBP19.43■□□□□ 0.7
NME3-204ENST00000563498 FSBPO95073 299 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 IGLV3-27P01718 113 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 POLR2EP19388 210 aaKnown RBP19.43■□□□□ 0.7
NME3-204ENST00000563498 PIK3R6Q5UE93 754 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 KRBA2Q6ZNG9 492 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 UNC45BQ8IWX7 931 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 PDCD7Q8N8D1 485 aaKnown RBP19.43■□□□□ 0.7
NME3-204ENST00000563498 AZIN2Q96A70 460 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 NCKAP1Q9Y2A7 1128 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 CELSR3Q9NYQ7 3312 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 CABIN1Q9Y6J0 2220 aa19.43■□□□□ 0.7
NME3-204ENST00000563498 LOC400499M0QZD8 3231 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 O00370 1275 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 VILLO15195 856 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 IGHV4-34P06331 123 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 VDRP11473 427 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 CD19P15391 556 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 CD70P32970 193 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 SLC11A2P49281 568 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 SGSHP51688 502 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 DAOAP59103 153 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 RACK1P63244 317 aaKnown RBP19.42■□□□□ 0.7
NME3-204ENST00000563498 KRT85P78386 507 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 CYP4F3Q08477 520 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 SFSWAPQ12872 951 aaKnown RBP19.42■□□□□ 0.7
NME3-204ENST00000563498 CBWD6Q4V339 395 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 PKDCCQ504Y2 493 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 CBWD3Q5JTY5 395 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 KCNT1Q5JUK3 1230 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 CBWD5Q5RIA9 395 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 NUGGCQ68CJ6 796 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 KIAA0895LQ68EN5 471 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 LAYNQ6UX15 382 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 ADAT2Q7Z6V5 191 aaKnown RBP19.42■□□□□ 0.7
NME3-204ENST00000563498 SCUBE3Q8IX30 993 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 WFDC5Q8TCV5 224 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 IRGQQ8WZA9 623 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 TTC17Q96AE7 1141 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 EEF2KMTQ96G04 330 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 ACE2Q9BYF1 805 aaPredicted RBP19.42■□□□□ 0.7
NME3-204ENST00000563498 PABPC3Q9H361 631 aaKnown RBP19.42■□□□□ 0.7
NME3-204ENST00000563498 KNL1Q8NG31 2342 aa19.42■□□□□ 0.7
NME3-204ENST00000563498 COL5A1P20908 1838 aaPredicted RBP19.41■□□□□ 0.7
NME3-204ENST00000563498 A0A087WV48 116 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 KCNK3O14649 394 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 ARID5BQ14865 1188 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 FAM133BQ5BKY9 247 aaKnown RBP19.41■□□□□ 0.7
NME3-204ENST00000563498 UBR7Q8N806 425 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 KDM1BQ8NB78 822 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 FIBINQ8TAL6 211 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 UBA3Q8TBC4 463 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 MYO19Q96H55 970 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 LMLNQ96KR4 655 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 FTSJ1Q9UET6 329 aa19.41■□□□□ 0.7
NME3-204ENST00000563498 A0A1B0GTQ1 180 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 A0A1W2PPC4 97 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 SLC16A3O15427 465 aaKnown RBP19.4■□□□□ 0.7
NME3-204ENST00000563498 ACSL4O60488 711 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 TBL1XO60907 577 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 ASLP04424 464 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 TBXAS1P24557 533 aaPredicted RBP19.4■□□□□ 0.7
NME3-204ENST00000563498 C21orf59P57076 290 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 ST8SIA6P61647 398 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 HNRNPA1L2Q32P51 320 aaKnown RBP19.4■□□□□ 0.7
NME3-204ENST00000563498 TCERG1LQ5VWI1 586 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 RFWD3Q6PCD5 774 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 LCLAT1Q6UWP7 414 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 TMPRSS12Q86WS5 348 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 MARCH9Q86YJ5 346 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 MFN1Q8IWA4 741 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 HJURPQ8NCD3 748 aaPredicted RBP19.4■□□□□ 0.7
NME3-204ENST00000563498 SLC35F5Q8WV83 523 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 SKA1Q96BD8 255 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 LRIG1Q96JA1 1093 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 FBXL12Q9NXK8 326 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 PCDHGA1Q9Y5H4 931 aa19.4■□□□□ 0.7
NME3-204ENST00000563498 FAM149AA5PLN7 773 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 RNASEH1O60930 286 aaKnown RBP19.39■□□□□ 0.69
NME3-204ENST00000563498 PAEPP09466 180 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 CDK4P11802 303 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 LCP1P13796 627 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 SLC6A4P31645 630 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 GALCP54803 685 aa19.39■□□□□ 0.69
NME3-204ENST00000563498 DCAF17Q5H9S7 520 aaPredicted RBP19.39■□□□□ 0.69
NME3-204ENST00000563498 DDX50Q9BQ39 737 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms