RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 IL27RAQ6UWB1 636 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 LAYNQ6UX15 382 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 AHI1Q8N157 1196 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 SPATA20Q8TB22 786 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 MYO19Q96H55 970 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 TSG101Q99816 390 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 ORAI3Q9BRQ5 295 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 TM9SF3Q9HD45 589 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 RMND1Q9NWS8 449 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 ARMCX3Q9UH62 379 aaPredicted RBP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 KIAA1257Q9ULG3 409 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 APOBEC2Q9Y235 224 aaKnown RBP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 BTBD3Q9Y2F9 522 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 SNX11Q9Y5W9 270 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 ATRXP46100 2492 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 KNL1Q8NG31 2342 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 KCNK3O14649 394 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 DKK1O94907 266 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 SEMA4FO95754 770 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 PAEPP09466 180 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 ATXN1LP0C7T5 689 aaKnown RBP17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 TBXAS1P24557 533 aaPredicted RBP17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 FMO5P49326 533 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 AFF3P51826 1226 aaKnown RBP17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 BIRC7Q96CA5 298 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 PRICKLE1Q96MT3 831 aaPredicted RBP17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 GSDMAQ96QA5 445 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 KIAA1522Q9P206 1035 aaPredicted RBP17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 PCDHB4Q9Y5E5 795 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 PCDHGB2Q9Y5G2 931 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
HDGFL3-203ENST00000563404 PTPRBP23467 1997 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 ACSL4O60488 711 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 LTFP02788 710 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 FYNP06241 537 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 BRD2P25440 801 aaKnown RBP17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 LRRC63Q05C16 580 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 COL9A2Q14055 689 aaPredicted RBP17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 CNGA2Q16280 664 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 MPP7Q5T2T1 576 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 MARCH9Q86YJ5 346 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 LMO3Q8TAP4 145 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 IRGQQ8WZA9 623 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 BTBD1Q9H0C5 482 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 OSGEPQ9NPF4 335 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 STIM2Q9P246 746 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 INTS6Q9UL03 887 aaKnown RBP17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 ANKRD6Q9Y2G4 727 aa17.46■□□□□ 0.39
HDGFL3-203ENST00000563404 BAHCC1Q9P281 2608 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 M0QYV0 167 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 FLRT2O43155 660 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 FSBPO95073 299 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 DNTTP04053 509 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 ATP5BP06576 529 aaKnown RBP17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 POLR2EP19388 210 aaKnown RBP17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 TBX4P57082 545 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 ZBTB16Q05516 673 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 NUGGCQ68CJ6 796 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 UNC45BQ8IWX7 931 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 FIBINQ8TAL6 211 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 MDM1Q8TC05 714 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 RHBDD1Q8TEB9 315 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 TTC17Q96AE7 1141 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 MRGPRX3Q96LB0 322 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 RSPH9Q9H1X1 276 aaPredicted RBP17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 FBRSQ9HAH7 460 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 SERGEFQ9UGK8 458 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 GPSM3Q9Y4H4 160 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 TMEM131Q92545 1883 aa17.45■□□□□ 0.38
HDGFL3-203ENST00000563404 SMG1Q96Q15 3661 aaKnown RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 PMM2O15305 246 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 IRAK2O43187 625 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 IGHV4-34P06331 123 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 CD27P26842 260 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 GRIA4P48058 902 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 SLC11A2P49281 568 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 FSCBQ5H9T9 825 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 ISM2Q6H9L7 571 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 C19orf48Q6RUI8 117 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 MMS22LQ6ZRQ5 1243 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 TMPRSS7Q7RTY8 843 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 ARHGEF19Q8IW93 802 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 MFN1Q8IWA4 741 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 PPM1KQ8N3J5 372 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 DQX1Q8TE96 717 aaKnown RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 AZIN2Q96A70 460 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 NT5C1BQ96P26 610 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 IRX2Q9BZI1 471 aaPredicted RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 MIS12Q9H081 205 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 CCDC86Q9H6F5 360 aaKnown RBP17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 SGK2Q9HBY8 427 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms