RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 PEG10Q86TG7 708 aaKnown RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 ANKRD18AQ8IVF6 992 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 CCDC117Q8IWD4 279 aaPredicted RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 SUGP1Q8IWZ8 645 aaKnown RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 LRRC71Q8N4P6 559 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHD9-205ENST00000562785 SCAMP5Q8TAC9 235 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 WDR60Q8WVS4 1066 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 SAYSD1Q9NPB0 183 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 ITM2CQ9NQX7 267 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 RXFP3Q9NSD7 469 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 SERTAD4Q9NUC0 356 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 MYRFQ9Y2G1 1151 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 RRP7AQ9Y3A4 280 aaKnown RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 LRP6O75581 1613 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 MEGF6O75095 1541 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 SOS1Q07889 1333 aaPredicted RBP6.36□□□□□ -1.39
CHD9-205ENST00000562785 FANCIQ9NVI1 1328 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 CCDC151A5D8V7 595 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A18PA6NE21 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A16PA6NEW6 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A9PA6NNJ1 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A5PA8MXJ8 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 B8ZZF3 427 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 MATN3O15232 486 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 NPHP1O15259 732 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 RPP40O75818 363 aaKnown RBP6.36□□□□□ -1.39
CHD9-205ENST00000562785 ADH4P08319 380 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A15PP0C7V4 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A14PP0C7W9 464 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 JUPP14923 745 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 AKT1P31749 480 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 MCM5P33992 734 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 ADRA1BP35368 520 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 GRIA3P42263 894 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 DGKQP52824 942 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 PDE1AP54750 535 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 SUMO2P61956 95 aaKnown RBP6.36□□□□□ -1.39
CHD9-205ENST00000562785 E2F1Q01094 437 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 KCNJ12Q14500 433 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 TAF5Q15542 800 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 PLEKHO1Q53GL0 409 aaPredicted RBP6.36□□□□□ -1.39
CHD9-205ENST00000562785 C1orf141Q5JVX7 400 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 FAM90A2PQ658T7 463 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 MSANTD2Q6P1R3 559 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 CRIP3Q6Q6R5 217 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 PIK3AP1Q6ZUJ8 805 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 PARS2Q7L3T8 475 aaKnown RBP6.36□□□□□ -1.39
CHD9-205ENST00000562785 RAB11FIP2Q7L804 512 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 VRK3Q8IV63 474 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 OVCA2Q8WZ82 227 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 EVI5LQ96CN4 794 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 PAAF1Q9BRP4 392 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 LRIT1Q9P2V4 623 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 NFU1Q9UMS0 254 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 KDM3BQ7LBC6 1761 aa6.36□□□□□ -1.39
CHD9-205ENST00000562785 RNF123Q5XPI4 1314 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 KIF16BQ96L93 1317 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 PCDH11XQ9BZA7 1347 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 PCDH11YQ9BZA8 1340 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 DRD1P21728 446 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 MCM7P33993 719 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 FOXI1Q12951 378 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 BTBD16Q32M84 506 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 GRHL2Q6ISB3 625 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 NFRKBQ6P4R8 1299 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 ANKRD16Q6P6B7 361 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 MTHFD1LQ6UB35 978 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 PTCHD4Q6ZW05 846 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 TRABD2AQ86V40 505 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 MOGAT3Q86VF5 341 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 SIRT6Q8N6T7 355 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 BEND2Q8NDZ0 799 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 THAP4Q8WY91 577 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 SLC9A6Q92581 669 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 CAVIN3Q969G5 261 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 VPS50Q96JG6 964 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 FAM167BQ9BTA0 163 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 TTPALQ9BTX7 342 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 FSD1LQ9BXM9 530 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 DUSP22Q9NRW4 184 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 BABAM1Q9NWV8 329 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 DLL3Q9NYJ7 618 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 KIF17Q9P2E2 1029 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 DAPP1Q9UN19 280 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 GTF2A1LQ9UNN4 478 aa6.35□□□□□ -1.39
CHD9-205ENST00000562785 TNS2Q63HR2 1409 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 SCN11AQ9UI33 1791 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 CEMIPQ8WUJ3 1361 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 NCANO14594 1321 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 LINC00473A8K010 186 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 H0YIZ8 118 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 CTIFO43310 598 aaKnown RBP6.34□□□□□ -1.39
CHD9-205ENST00000562785 TMPRSS11DO60235 418 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 TTLL1O95922 423 aa6.34□□□□□ -1.39
CHD9-205ENST00000562785 HSP90AB1P08238 724 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms