RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 SMARCA1P28370 1054 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 TPP2P29144 1249 aaPredicted RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 NTSR1P30989 418 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 WASP42768 502 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 ALDH1A3P47895 512 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 QARSP47897 775 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 DNM2P50570 870 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 CLCNKBP51801 687 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 RPL10AP62906 217 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 DUSP4Q13115 394 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 MRPL49Q13405 166 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 UPP1Q16831 310 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 CTXN3Q4LDR2 81 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 CEP55Q53EZ4 464 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 ZNF280DQ6N043 979 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 KIAA1324Q6UXG2 1013 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 ITIH5Q86UX2 942 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 SMAP1Q8IYB5 467 aaPredicted RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 ARL14EPQ8N8R7 260 aaPredicted RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 SNX19Q92543 992 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 TRIM6Q9C030 488 aaPredicted RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 ITM2CQ9NQX7 267 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 ARHGEF4Q9NR80 690 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 NRBP2Q9NSY0 501 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 ENTPD2Q9Y5L3 495 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 COL4A3BPQ9Y5P4 624 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 TRIP11Q15643 1979 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 DIDO1Q9BTC0 2240 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 KMT2CQ8NEZ4 4911 aaKnown RBP6.34□□□□□ -1.39
TCF4-213ENST00000562543 TLN2Q9Y4G6 2542 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 MYMKA6NI61 221 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ERLIN2O94905 339 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 SLC5A2P31639 672 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
TCF4-213ENST00000562543 KIR3DL1P43629 444 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ADCY7P51828 1080 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 KDSRQ06136 332 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 PCBP1Q15365 356 aaKnown RBP eCLIP6.33□□□□□ -1.4
TCF4-213ENST00000562543 WDR36Q8NI36 951 aaKnown RBP6.33□□□□□ -1.4
TCF4-213ENST00000562543 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 UBE2Q2Q8WVN8 375 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ARHGAP45Q92619 1136 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ERLEC1Q96DZ1 483 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 PGLYRP2Q96PD5 576 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 GABRG3Q99928 467 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ORAI3Q9BRQ5 295 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 C12orf49Q9H741 205 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 PRDM8Q9NQV8 689 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.33□□□□□ -1.4
TCF4-213ENST00000562543 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 ANAPC1Q9H1A4 1944 aa6.33□□□□□ -1.4
TCF4-213ENST00000562543 NEDD4P46934 1319 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 MYOCOSA0A1B0GUC4 107 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 A0A1B0GVM2 712 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TCP11X1B4DZS4 312 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 VILLO15195 856 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 GRID2O43424 1007 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 PRICKLE3O43900 615 aaPredicted RBP6.32□□□□□ -1.4
TCF4-213ENST00000562543 NPTXRO95502 500 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 PGRP06401 933 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TCF3P15923 654 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 OXTRP30559 389 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TPMTP51580 245 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 RESTQ13127 1097 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 UGCGQ16739 394 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 UBE2SQ16763 222 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 VPS53Q5VIR6 699 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TXNDC8Q6A555 127 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 ADAT2Q7Z6V5 191 aaKnown RBP6.32□□□□□ -1.4
TCF4-213ENST00000562543 MON1AQ86VX9 555 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TTC9BQ8N6N2 239 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TEX19Q8NA77 164 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 KIF1BPQ96EK5 621 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 ACOX2Q99424 681 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 C6orf106Q9H6K1 298 aaPredicted RBP6.32□□□□□ -1.4
TCF4-213ENST00000562543 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 PCDHA6Q9UN73 950 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TP53TG5Q9Y2B4 290 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 PCDHA8Q9Y5H6 950 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 RAD54BQ9Y620 910 aa6.32□□□□□ -1.4
TCF4-213ENST00000562543 TMEM150BA6NC51 233 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.31□□□□□ -1.4
TCF4-213ENST00000562543 TRIM38O00635 465 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 TBX3O15119 743 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 SIGLEC6O43699 453 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 SOAT2O75908 522 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 GP1BAP07359 652 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 PCP11498 1178 aaKnown RBP6.31□□□□□ -1.4
TCF4-213ENST00000562543 BMP7P18075 431 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 ARF4P18085 180 aaPredicted RBP6.31□□□□□ -1.4
TCF4-213ENST00000562543 ATP2B1P20020 1258 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 NR1D1P20393 614 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 ITGA3P26006 1051 aa6.31□□□□□ -1.4
TCF4-213ENST00000562543 NMT1P30419 496 aaKnown RBP6.31□□□□□ -1.4
TCF4-213ENST00000562543 LEPRP48357 1165 aaKnown RBP6.31□□□□□ -1.4
TCF4-213ENST00000562543 C21orf59P57076 290 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms