RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 TIMP1P01033 207 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 APRTP07741 180 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 YWHAQP27348 245 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 GCAP28676 217 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 EPHB2P29323 1055 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 HOXC13P31276 330 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 DEFB103AP81534 67 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 AP1B1Q10567 949 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 WASHC5Q12768 1159 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 MGAT5BQ3V5L5 792 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 ANKRD20A3Q5VUR7 823 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
PKD1-225ENST00000562297 IGDCC3Q8IVU1 814 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 ARHGAP18Q8N392 663 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 SERPINB11Q96P15 392 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 SEPT5Q99719 369 aaPredicted RBP17.06■□□□□ 0.32
PKD1-225ENST00000562297 LGALS13Q9UHV8 139 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 BACE2Q9Y5Z0 518 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 TEX264Q9Y6I9 313 aa17.06■□□□□ 0.32
PKD1-225ENST00000562297 RNF103O00237 685 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
PKD1-225ENST00000562297 RTN3O95197 1032 aaPredicted RBP17.05■□□□□ 0.32
PKD1-225ENST00000562297 CSF2RAP15509 400 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 ATF6P18850 670 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 MAGEA3P43357 314 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 IRAK1P51617 712 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 SEMA5AQ13591 1074 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
PKD1-225ENST00000562297 PDZD4Q76G19 769 aaPredicted RBP17.05■□□□□ 0.32
PKD1-225ENST00000562297 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 ARFGAP2Q8N6H7 521 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 MCUQ8NE86 351 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 FBXO36Q8NEA4 188 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 FRMD8Q9BZ67 464 aaPredicted RBP17.05■□□□□ 0.32
PKD1-225ENST00000562297 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 TLR6Q9Y2C9 796 aa17.05■□□□□ 0.32
PKD1-225ENST00000562297 E7EVH7 732 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 KIAA0355O15063 1070 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 AVILO75366 819 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 RPL17P18621 184 aaKnown RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 TPSB2P20231 275 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 MMP13P45452 471 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 PPIDQ08752 370 aaKnown RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 GALNT2Q10471 571 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 TAF10Q12962 218 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 TPSAB1Q15661 275 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 PSMD5Q16401 504 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 BBS9Q3SYG4 887 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 PPP1R21Q6ZMI0 780 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 ARHGEF18Q6ZSZ5 1173 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 DPF3Q92784 378 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 FBXO32Q969P5 355 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 FCRL2Q96LA5 508 aaPredicted RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
PKD1-225ENST00000562297 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 NYNRINQ9P2P1 1898 aaKnown RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 NCAM2O15394 837 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 OPHN1O60890 802 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 CDH16O75309 829 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 IVLP07476 585 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 SSTR1P30872 391 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 MDH1P40925 334 aaKnown RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 CCDC38Q502W7 563 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 RASIP1Q5U651 963 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 LRRC31Q6UY01 552 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 CAPN12Q6ZSI9 719 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 EXOC3L1Q86VI1 746 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 CYP4X1Q8N118 509 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 ATP11CQ8NB49 1132 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 CCNYQ8ND76 341 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 CCDC77Q9BR77 488 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 SIK2Q9H0K1 926 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
PKD1-225ENST00000562297 VPS37BQ9H9H4 285 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
PKD1-225ENST00000562297 A6NNZ2 444 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 SRGAP2BP0DMP2 458 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 HTR7P34969 479 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 OR1D2P34982 312 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 ELK3P41970 407 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 PSEN1P49768 467 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 WDR5P61964 334 aaKnown RBP17.03■□□□□ 0.32
PKD1-225ENST00000562297 GNGT1P63211 74 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 NRG1Q02297 640 aaPredicted RBP17.03■□□□□ 0.32
PKD1-225ENST00000562297 TUBB8Q3ZCM7 444 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 FOXR1Q6PIV2 292 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 TDRPQ86YL5 185 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 ZNF567Q8N184 647 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 HDAC11Q96DB2 347 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 CLSTN3Q9BQT9 956 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
PKD1-225ENST00000562297 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms