RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
NSMCE1-202ENST00000561960 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 A0A087WV48 116 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 YEATS4O95619 227 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 LDOC1O95751 146 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 ITGAVP06756 1048 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 MAT2AP31153 395 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 HARS2P49590 506 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 PSEN1P49768 467 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 EIF4HQ15056 248 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 KIAA0895LQ68EN5 471 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 MMAAQ8IVH4 418 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 CPXM2Q8N436 756 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 CARNMT1Q8N4J0 409 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 PLD4Q96BZ4 506 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 TMEM176AQ96HP8 235 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 PNPLA8Q9NP80 782 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 MORC2Q9Y6X9 1032 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 KIF26BQ2KJY2 2108 aa12.17□□□□□ -0.46
NSMCE1-202ENST00000561960 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 A0A1B0GTQ1 180 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 PDXKO00764 312 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 MYF5P13349 255 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 KRT13P13646 458 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 CD19P15391 556 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 VAV1P15498 845 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 POLR2EP19388 210 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 CSKP41240 450 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 STK19P49842 368 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 GALCP54803 685 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 PPP2CBP62714 309 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 RPS24P62847 133 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 PPP2CAP67775 309 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 C19orf57Q0VDD7 668 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 KCNJ12Q14500 433 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 RAB41Q5JT25 222 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 SLC9A9Q8IVB4 645 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 FAM217AQ8IXS0 508 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 PRICKLE1Q96MT3 831 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 MYOCQ99972 504 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 MAGEF1Q9HAY2 307 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
NSMCE1-202ENST00000561960 NPC1O15118 1278 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 BRINP1O60477 761 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 RFPL3O75679 317 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 PFKFB1P16118 471 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 ACADVLP49748 655 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 CXADRP78310 365 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 DCAF17Q5H9S7 520 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 C6orf118Q5T5N4 469 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 KDM7AQ6ZMT4 941 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 CIR1Q86X95 450 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 MFN1Q8IWA4 741 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 AHI1Q8N157 1196 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 AADATQ8N5Z0 425 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 NXPE2Q96DL1 559 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 MYO19Q96H55 970 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 UBL7Q96S82 380 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 OMDQ99983 421 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 SLC2A11Q9BYW1 496 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 PRORYQ9H606 182 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 LRRC4Q9HBW1 653 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 DKK4Q9UBT3 224 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 INTS6Q9UL03 887 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 CEP83Q9Y592 693 aa12.15□□□□□ -0.46
NSMCE1-202ENST00000561960 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 IKBKBO14920 756 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 PCDHGA12O60330 932 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 GABBR2O75899 941 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
NSMCE1-202ENST00000561960 PLA2G2AP14555 144 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms