RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 IKBKGQ9Y6K9 419 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 CYP3A7-CYP3A51PA0A087WV96 503 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 CLOCKO15516 846 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF26P17031 533 aaPredicted RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 CD247P20963 164 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 CYP3A7P24462 503 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 IFITM2Q01629 132 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PTP4A2Q12974 167 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 SELENBP1Q13228 472 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 C2CD6Q53TS8 623 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 LILRA2Q8N149 483 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 FIBCD1Q8N539 461 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 SPATA17Q96L03 361 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 WDR83Q9BRX9 315 aaKnown RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 TMEM79Q9BSE2 394 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 MARCH7Q9H992 704 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 TMEM9Q9P0T7 183 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PRPF19Q9UMS4 504 aaKnown RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 A0A0B4J269 797 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 CCDC195A0A1B0GUA6 201 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF839A8K0R7 811 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 NOL3O60936 208 aaKnown RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 SNNO75324 88 aaPredicted RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 MTRF1O75570 445 aaKnown RBP19.1■□□□□ 0.65
RAB40C-206ENST00000561781 MYL4P12829 197 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 KRT10P13645 584 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PRKACBP22694 351 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PTK7Q13308 1070 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 TUBB3Q13509 450 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 FLOT2Q14254 428 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 FNBP1LQ5T0N5 605 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 BTBD8Q5XKL5 378 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 CDHR3Q6ZTQ4 885 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 FAM178BQ8IXR5 827 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 EFCAB3Q8N7B9 438 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PDPRQ8NCN5 879 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 TANKQ92844 425 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 PKP2Q99959 881 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 IFT122Q9HBG6 1241 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 KLHL11Q9NVR0 708 aa19.1■□□□□ 0.65
RAB40C-206ENST00000561781 AKR1B1P15121 316 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 L1CAMP32004 1257 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 VAMP7P51809 220 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 GALNT2Q10471 571 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 TRPC3Q13507 836 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 ARHGEF6Q15052 776 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 CCSAPQ6IQ19 270 aaPredicted RBP19.09■□□□□ 0.65
RAB40C-206ENST00000561781 NUDCD3Q8IVD9 361 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 RHOT1Q8IXI2 618 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 DDX1Q92499 740 aaKnown RBP19.09■□□□□ 0.65
RAB40C-206ENST00000561781 SHC3Q92529 594 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 FAR2Q96K12 515 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 MBOAT7Q96N66 472 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PCIF1Q9H4Z3 704 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 DNAJC16Q9Y2G8 782 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PCDHGA3Q9Y5H0 932 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PCDHGA11Q9Y5H2 935 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PPP2R3BQ9Y5P8 575 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PRSS51A0A1B0GVH4 220 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 PSTPIP1O43586 416 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 CALCAP01258 141 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 HOXD10P28358 340 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 CDH15P55291 814 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 MRPS9P82933 396 aaKnown RBP19.09■□□□□ 0.65
RAB40C-206ENST00000561781 GRM1Q13255 1194 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 SUZ12Q15022 739 aaKnown RBP19.09■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF618Q5T7W0 954 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 C4orf22Q6V702 233 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 RHPN2Q8IUC4 686 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 KATNAL2Q8IYT4 538 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 FBXO36Q8NEA4 188 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 CAPSLQ8WWF8 208 aa19.09■□□□□ 0.65
RAB40C-206ENST00000561781 TBKBP1A7MCY6 615 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 DYNC1LI2O43237 492 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 STAM2O75886 525 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 CRYZL1O95825 349 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 TSHRP16473 764 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 ADSLP30566 484 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 SLC16A2P36021 539 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 NOVP48745 357 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 TPTEP56180 551 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 GNA12Q03113 381 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 DGKZQ13574 1117 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 ALCAMQ13740 583 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 SUPT20HL1Q3ZLR7 823 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 KLRG1Q96E93 195 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 SMARCAD1Q9H4L7 1026 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 GBA2Q9HCG7 927 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 XAB2Q9HCS7 855 aaKnown RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 PLLPQ9Y342 182 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 C1orf232A0A0U1RR37 186 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 PSMD11O00231 422 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 SPAG6O75602 509 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 PROSCO94903 275 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 IFNB1P01574 187 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 AP3M2P53677 418 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 FAAP100Q0VG06 881 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 VGLL4Q14135 290 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 PTK2BQ14289 1009 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms