RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 JAK2O60674 1132 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 STC2O76061 302 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 AGFG2O95081 481 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 C7P10643 843 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 RARGP13631 454 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 ELAVL4P26378 380 aaKnown RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 CORO1AP31146 461 aaKnown RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 DDIT3P35638 169 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 NUDT1P36639 197 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 PRPHP41219 470 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 ST8SIA6P61647 398 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 COG7P83436 770 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 PDE4CQ08493 712 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 DUOXA2Q1HG44 320 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 TMEM215Q68D42 235 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
HERC1-210ENST00000560897 SPATS2Q86XZ4 545 aaKnown RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 SYCP3Q8IZU3 236 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 SLC25A45Q8N413 288 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 RBBP8NLQ8NC74 664 aaPredicted RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 RASSF8Q8NHQ8 419 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 TPCN2Q8NHX9 752 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 ARRDC3Q96B67 414 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 CDK5RAP1Q96SZ6 601 aaKnown RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 RSPH9Q9H1X1 276 aaPredicted RBP9.98□□□□□ -0.81
HERC1-210ENST00000560897 INTS13Q9NVM9 706 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 NLGN3Q9NZ94 848 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 RASAL2Q9UJF2 1139 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 ENTPD2Q9Y5L3 495 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 UBE4BO95155 1302 aa9.98□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3DA0A087WVF3 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3IA0A087WXS9 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3EA0A087X179 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3KA0A087X1G2 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 CCDC187A0A096LP49 1063 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3FA6NER0 549 aaPredicted RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3LB9A6J9 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TCEA3O75764 348 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 HMBSP08397 361 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 DLDP09622 509 aaKnown RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 FAM163BP0C2L3 166 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3HP0C7X1 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 RALAP11233 206 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 POLR2EP19388 210 aaKnown RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 DGKAP23743 735 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 HARS2P49590 506 aaKnown RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 KCNJ12Q14500 433 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 SURF1Q15526 300 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 CST6Q15828 149 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 KMT5BQ4FZB7 885 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 SCARA3Q6AZY7 606 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3GQ6DHY5 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3CQ6IPX1 549 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 TBC1D3Q8IZP1 549 aaPredicted RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 PRR11Q96HE9 360 aaPredicted RBP9.97□□□□□ -0.81
HERC1-210ENST00000560897 TNIP3Q96KP6 325 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 ACCSQ96QU6 501 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 ST6GALNAC4Q9H4F1 302 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 SYNDIG1Q9H7V2 258 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 NCKIPSDQ9NZQ3 722 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 SERGEFQ9UGK8 458 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 NAGPAQ9UK23 515 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 NUDT5Q9UKK9 219 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 CLEC4EQ9ULY5 219 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
HERC1-210ENST00000560897 LRRK1Q38SD2 2015 aa9.96□□□□□ -0.81
HERC1-210ENST00000560897 A0A1W2PNU3 283 aaPredicted RBP9.96□□□□□ -0.82
HERC1-210ENST00000560897 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 CPED1A4D0V7 1026 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
HERC1-210ENST00000560897 LIPCP11150 499 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.82
HERC1-210ENST00000560897 TGM2P21980 687 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 GARTP22102 1010 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 SLC5A2P31639 672 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 PGFP49763 221 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 PSEN1P49768 467 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 ADPRHP54922 357 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MAP3K7CLP57077 242 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MORC3Q14149 939 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 WDR72Q3MJ13 1102 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 TMEM119Q4V9L6 283 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MPPE1Q53F39 396 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MBLAC2Q68D91 279 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 DYMQ7RTS9 669 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 DSG4Q86SJ6 1040 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 DENND1CQ8IV53 801 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MMAAQ8IVH4 418 aaKnown RBP9.96□□□□□ -0.82
HERC1-210ENST00000560897 CPXM2Q8N436 756 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 P2RY11Q96G91 374 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 FIZ1Q96SL8 496 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MRPL44Q9H9J2 332 aaKnown RBP9.96□□□□□ -0.82
HERC1-210ENST00000560897 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.82
HERC1-210ENST00000560897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.96□□□□□ -0.82
HERC1-210ENST00000560897 UCKL1Q9NWZ5 548 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms