RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 FUT11Q495W5 492 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 FSCBQ5H9T9 825 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 MPP7Q5T2T1 576 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 CHST9Q7L1S5 443 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 KIAA0907Q7Z7F0 614 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 PHLDB2Q86SQ0 1253 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 CHSY1Q86X52 802 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 CIR1Q86X95 450 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF366Q8N895 744 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 HJURPQ8NCD3 748 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 BTN2A3PQ96KV6 586 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 NPY6RQ99463 290 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 PRMT1Q99873 361 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
RABGGTA-216ENST00000560243 CEP192Q8TEP8 1941 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 I6L893 689 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 M0QYT0 321 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 GDF9O60383 454 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 CYP1A1P04798 512 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 HLA-EP13747 358 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 NOS2P35228 1153 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 FLT3P36888 993 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 STAT1P42224 750 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MATKP42679 507 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 NUMBP49757 651 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 IRAK1P51617 712 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 SNX16P57768 344 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 LMAN2Q12907 356 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 EIF4HQ15056 248 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 ELF2Q15723 593 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 CSRP2Q16527 193 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 PTPRNQ16849 979 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MBLAC2Q68D91 279 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 ZDHHC17Q8IUH5 632 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MFN1Q8IWA4 741 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 TMEFF1Q8IYR6 380 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 CARNMT1Q8N4J0 409 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 FIBINQ8TAL6 211 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 UCMAQ8WVF2 138 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 RNF34Q969K3 372 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 LOXL4Q96JB6 756 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MRGPRX1Q96LB2 322 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 MKRN2Q9H000 416 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 TMPRSS4Q9NRS4 437 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 RXFP3Q9NSD7 469 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 PIGVQ9NUD9 493 aa12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 INTS6Q9UL03 887 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 TNRC6BQ9UPQ9 1833 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 CNOT1A5YKK6 2376 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-216ENST00000560243 SMTNL1A8MU46 457 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 MAP3K13O43283 966 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 TIMM44O43615 452 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 LRP3O75074 770 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 RHOBTB1O94844 696 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 LUC7L3O95232 432 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 GJB6O95452 261 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ADCY5O95622 1261 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 MMP8P22894 467 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CCR1P32246 355 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 MPLP40238 635 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 PTGER3P43115 390 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ID4P47928 161 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 SULT1E1P49888 294 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ATXN1P54253 815 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CREB5Q02930 508 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CENPCQ03188 943 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 RSPO4Q2I0M5 234 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 RAB6CQ53S08 254 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 TCEAL6Q6IPX3 200 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 FBXL22Q6P050 247 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 KIAA1324Q6UXG2 1013 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 SERPINA13PQ6UXR4 307 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ARMCX6Q7L4S7 300 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 C14orf80Q86SX3 495 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF677Q86XU0 584 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CACUL1Q86Y37 369 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 AHI1Q8N157 1196 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 DEFB119Q8N690 84 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 GPR161Q8N6U8 529 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 EMC1Q8N766 993 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 ATP6V0D2Q8N8Y2 350 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 WFIKKN2Q8TEU8 576 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms