RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC25A13Q9UJS0 675 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 RBM47A0AV96 593 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 CCL16O15467 120 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 GPC4O75487 556 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 AKT1P31749 480 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 GATMP50440 423 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 NSUN2Q08J23 767 aaKnown RBP eCLIP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ACAP1Q15027 740 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 KLHL38Q2WGJ6 581 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 DAB2IPQ5VWQ8 1189 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 FBXO25Q8TCJ0 367 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 BLOC1S5Q8TDH9 187 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 KRT35Q92764 455 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 FBXL18Q96ME1 805 aa10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 ALG13Q9NP73 1137 aaKnown RBP10.95□□□□□ -0.66
CARMIL3-202ENST00000559694 LAMB1P07942 1786 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TBC1D3BA6NDS4 549 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TRDMT1O14717 391 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 HOXD13P35453 343 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ITGA8P53708 1063 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 AP2B1P63010 937 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC4A11Q8NBS3 891 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TFAP2BQ92481 460 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 BADQ92934 168 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 HSD3B7Q9H2F3 369 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SAGE1Q9NXZ1 904 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 NAALADL1Q9UQQ1 740 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 COQ4Q9Y3A0 265 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 RWDD3Q9Y3V2 267 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 AP3B1O00203 1094 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF197O14709 1029 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 STX7O15400 261 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 DNAJC6O75061 913 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 VNN1O95497 513 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 CHRNA1P02708 482 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TARSP26639 723 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TYK2P29597 1187 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 PGM1P36871 562 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ELF3P78545 371 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SOWAHAQ2M3V2 549 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TIGD7Q6NT04 549 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 NT5DC3Q86UY8 548 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 CACUL1Q86Y37 369 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 MFN1Q8IWA4 741 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ERLEC1Q96DZ1 483 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TRABDQ9H4I3 376 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 COPEO14579 308 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SOAT2O75908 522 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 SNUPNO95149 360 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 MMP8P22894 467 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 RABGGTBP53611 331 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 GPM6BQ13491 265 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 STAT4Q14765 748 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 PMF1Q6P1K2 205 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 TTC23LQ6PF05 361 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 C4orf33Q8N1A6 199 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 JOSD2Q8TAC2 188 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 CSGALNACT1Q8TDX6 532 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 LPIN3Q9BQK8 851 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ROPN1BQ9BZX4 212 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 ROPN1Q9HAT0 212 aaPredicted RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 AFF4Q9UHB7 1163 aaKnown RBP10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 PCDHA3Q9Y5H8 950 aa10.94□□□□□ -0.66
CARMIL3-202ENST00000559694 MDM4O15151 490 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 HNRNPH3P31942 346 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 MATKP42679 507 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 FNTAP49354 379 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 CCDC15Q0P6D6 951 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 DNAJC3Q13217 504 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ATAT1Q5SQI0 421 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 TTC8Q8TAM2 541 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 OLFM3Q96PB7 478 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC13A1Q9BZW2 595 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 NDUFS3O75489 264 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 NCF2P19878 526 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 CHKAP35790 457 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 PBX1P40424 430 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC5A3P53794 718 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 POU5F1Q01860 360 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 KREMEN2Q8NCW0 462 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 PTPRN2Q92932 1015 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF669Q96BR6 464 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 LHX5Q9H2C1 402 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 GMIPQ9P107 970 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 FBXL21Q9UKT6 434 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 REXO2Q9Y3B8 237 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 IGKV6-21A0A0C4DH24 114 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC9A3R1O14745 358 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 PJA2O43164 708 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 CCDC22O60826 627 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 RNASEH1O60930 286 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 C8AP07357 584 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms