RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SORCS1Q8WY21 1168 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ERLEC1Q96DZ1 483 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 BTN2A3PQ96KV6 586 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 SPAG5Q96R06 1193 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 DDX50Q9BQ39 737 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 NAT10Q9H0A0 1025 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 ARRDC1-AS1Q9H2J1 176 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 DDIT4Q9NX09 232 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 PCDHGA5Q9Y5G8 931 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ADAMTS9Q9P2N4 1935 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 PCDH15Q96QU1 1955 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 SYNJ2BP-COX16A0A087WUM0 186 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 KCNU1A8MYU2 1149 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 RHOBTB1O94844 696 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CDK11BP21127 795 aaKnown RBP11.34□□□□□ -0.59
SPG11-216ENST00000559347 TACR2P21452 398 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 PRKCHP24723 683 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CCR1P32246 355 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CD70P32970 193 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 NOS2P35228 1153 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 MATKP42679 507 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 FMO1Q01740 532 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CDR2Q01850 454 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 UBXN1Q04323 297 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 STARD3Q14849 445 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 E2F5Q15329 346 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CCDC6Q16204 474 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 C2CD6Q53TS8 623 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 FAM102AQ5T9C2 384 aaPredicted RBP11.34□□□□□ -0.59
SPG11-216ENST00000559347 SERPINA13PQ6UXR4 307 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 ADIPOR2Q86V24 386 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 ATP6V0D2Q8N8Y2 350 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
SPG11-216ENST00000559347 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 LMLNQ96KR4 655 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 MRGPRX1Q96LB2 322 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 NPY6RQ99463 290 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 PRMT1Q99873 361 aaKnown RBP11.34□□□□□ -0.59
SPG11-216ENST00000559347 SLC6A17Q9H1V8 727 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 CD93Q9NPY3 652 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPG11-216ENST00000559347 DLL3Q9NYJ7 618 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 COX16Q9P0S2 106 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 STIM2Q9P246 746 aa11.34□□□□□ -0.59
SPG11-216ENST00000559347 MBD1Q9UIS9 605 aaPredicted RBP11.34□□□□□ -0.59
SPG11-216ENST00000559347 IGHV1OR15-9A0A0B4J2B8 117 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 BCLAF3A2AJT9 711 aaKnown RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 PRR5-ARHGAP8B1AHC4 643 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 F5H5T6 163 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 M0QYT0 321 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 LUC7L3O95232 432 aaKnown RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 CYP1A1P04798 512 aaPredicted RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 SLC2A3P11169 496 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CHRNB2P17787 502 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 TFE3P19532 575 aaPredicted RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 ABCB4P21439 1286 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 FLT3P36888 993 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 STAT1P42224 750 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 COPAP53621 1224 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 ARHGAP8P85298 464 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 ARID5AQ03989 594 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 LMAN2Q12907 356 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CDH18Q13634 790 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 SF3A2Q15428 464 aaKnown RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 PTPRNQ16849 979 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 NAA35Q5VZE5 725 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 MBLAC2Q68D91 279 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 ERICH1Q86X53 443 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 LGI2Q8N0V4 545 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CFAP52Q8N1V2 620 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 FIBINQ8TAL6 211 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CYB5D2Q8WUJ1 264 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 NT5C3BQ969T7 300 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
SPG11-216ENST00000559347 TMEM245Q9H330 911 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 SMOC1Q9H4F8 434 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 PIGVQ9NUD9 493 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 RRN3Q9NYV6 651 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPG11-216ENST00000559347 STAP1Q9ULZ2 295 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 PI4KAP42356 2102 aa11.33□□□□□ -0.6
SPG11-216ENST00000559347 SYCE3A1L190 88 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 TIMM44O43615 452 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 ZNF217O75362 1048 aa11.32□□□□□ -0.6
SPG11-216ENST00000559347 EPHX1P07099 455 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms