RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MTAPQ13126 283 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 GEN1Q17RS7 908 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 FSCBQ5H9T9 825 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 BRMS1LQ5PSV4 323 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 FAM72AQ5TYM5 149 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 EMC10Q5UCC4 262 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 FAM72DQ6L9T8 149 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 PPP1R2P3Q6NXS1 205 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 KIAA0907Q7Z7F0 614 aaPredicted RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 FAM72BQ86X60 149 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 LGI2Q8N0V4 545 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 TERB1Q8NA31 727 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 PRSS33Q8NF86 280 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 FNIP1Q8TF40 1166 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 INTS6Q9UL03 887 aaKnown RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 FANCMQ8IYD8 2048 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 CKAP5Q14008 2032 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 IGLV3-10A0A075B6K4 115 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 A0A0U1RQJ8 604 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 TBL1XO60907 577 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 RNF40O75150 1001 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 LRCH4O75427 683 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 CNTN5O94779 1100 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 IL1R2P27930 398 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 GBP1P32455 592 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 CD70P32970 193 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ADRA1BP35368 520 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 SCAPQ12770 1279 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 NR1H3Q13133 447 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 CA9Q16790 459 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ALFQ53S48 1182 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 TXNRD3NBQ6F5E7 133 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 CXorf57Q6NSI4 855 aaKnown RBP11.83□□□□□ -0.52
SNX1-204ENST00000559061 C1orf228Q6PIY5 440 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
SNX1-204ENST00000559061 CHSY1Q86X52 802 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 PYROXD2Q8N2H3 581 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX1-204ENST00000559061 ATP6V0D2Q8N8Y2 350 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 DTWD2Q8NBA8 298 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 USP33Q8TEY7 942 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ATRIPQ8WXE1 791 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 PNKPQ96T60 521 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 NUP85Q9BW27 656 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 OSGEPQ9NPF4 335 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 ARHGEF4Q9NR80 690 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 VANGL2Q9ULK5 521 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 SLC27A6Q9Y2P4 619 aa11.83□□□□□ -0.52
SNX1-204ENST00000559061 AKR1B10O60218 316 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 ADAM23O75077 832 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 F9P00740 461 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 TPM1P09493 284 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 TMEM253P0C7T8 217 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 SLC2A3P11169 496 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 DRD1P21728 446 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 PSMA2P25787 234 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 DGKGP49619 791 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 SEC13P55735 322 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 TCF15Q12870 199 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 LMAN2Q12907 356 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 FUT11Q495W5 492 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 MPPE1Q53F39 396 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 MPP7Q5T2T1 576 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 EGFLAMQ63HQ2 1017 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 GRAMD4Q6IC98 578 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 DCUN1D2Q6PH85 259 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 ADIPOR2Q86V24 386 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 HJURPQ8NCD3 748 aaPredicted RBP11.82□□□□□ -0.52
SNX1-204ENST00000559061 DDI1Q8WTU0 396 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 SORCS1Q8WY21 1168 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 NTAN1Q96AB6 310 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 TMA16Q96EY4 203 aaKnown RBP11.82□□□□□ -0.52
SNX1-204ENST00000559061 ALG14Q96F25 216 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 CCDC42Q96M95 316 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 ACOX2Q99424 681 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 NELL2Q99435 816 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 PRMT8Q9NR22 394 aaPredicted RBP11.82□□□□□ -0.52
SNX1-204ENST00000559061 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
SNX1-204ENST00000559061 GPATCH2LQ9NWQ4 482 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 IMPACTQ9P2X3 320 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 SALL4Q9UJQ4 1053 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 FZD10Q9ULW2 581 aa11.82□□□□□ -0.52
SNX1-204ENST00000559061 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
SNX1-204ENST00000559061 DMDP11532 3685 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 MYO15AQ9UKN7 3530 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 DRGXA6NNA5 263 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 E9PAM4 449 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms