RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 CPNE1Q99829 537 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 FERMT1Q9BQL6 677 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PPP1R12CQ9BZL4 782 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 NMUR2Q9GZQ4 415 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 VCX3BQ9H321 246 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 VCX3AQ9NNX9 186 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CREBZFQ9NS37 354 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 NSMCE4AQ9NXX6 385 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 NDUFA13Q9P0J0 144 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 SAE1Q9UBE0 346 aaPredicted RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 MID2Q9UJV3 735 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 UBQLN1Q9UMX0 589 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 SMIM35A0A1B0GVV1 85 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 MAGEB16A2A368 324 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 SPECC1L-ADORA2AF8WAN1 911 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CASQ2O14958 399 aaPredicted RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PEX1O43933 1283 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CIB2O75838 187 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PENKP01210 267 aaPredicted RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 SERPINE1P05121 402 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 APOA4P06727 396 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PABPC4LP0CB38 370 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CSH1P0DML2 217 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CSH2P0DML3 217 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 TXNP10599 105 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 BGNP21810 368 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 AMPD1P23109 780 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 LRPAP1P30533 357 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CSE1LP55060 971 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CDH8P55286 799 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 DYNLT1P63172 113 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CREB5Q02930 508 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 MMRN1Q13201 1228 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 MARCH8Q5T0T0 291 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 GRTP1Q5TC63 336 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PGM2L1Q6PCE3 622 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 TREML1Q86YW5 311 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 REM2Q8IYK8 340 aaPredicted RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 ULK2Q8IYT8 1036 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 ALDH16A1Q8IZ83 802 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 RBM15BQ8NDT2 890 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 HTR3CQ8WXA8 447 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 ARNTL2Q8WYA1 636 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 CDKL2Q92772 493 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 FATE1Q969F0 183 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 HNRNPABQ99729 332 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 SPATA16Q9BXB7 569 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PDGFDQ9GZP0 370 aaPredicted RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 IQCGQ9H095 443 aaKnown RBP6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 DTLQ9NZJ0 730 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PLXNA3P51805 1871 aa6.64□□□□□ -1.35
AC087516.2-201ENST00000558963 PCNTO95613 3336 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 B2RBV5 119 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GOLGA8MH3BSY2 632 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ZNF195O14628 629 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PLIN3O60664 434 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 AP1G2O75843 785 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FBXO21O94952 628 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PROCP04070 461 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 FGF3P11487 239 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 HARSP12081 509 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CLCN3P51790 818 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 YWHAGP61981 247 aaKnown RBP eCLIP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 DEUP1Q05D60 604 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PDK1Q15118 436 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PPP1R26Q5T8A7 1209 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 OR6B2Q6IFH4 312 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NPNTQ6UXI9 565 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 RIPOR1Q6ZS17 1223 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CDHR3Q6ZTQ4 885 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TMEM135Q86UB9 458 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PDSS2Q86YH6 399 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ADGRF2Q8IZF7 708 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 TFB1MQ8WVM0 346 aaKnown RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 GBP5Q96PP8 586 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NPY6RQ99463 290 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CENPKQ9BS16 269 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NDE1Q9NXR1 346 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 EMCNQ9ULC0 261 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 NME7Q9Y5B8 376 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 A0A087WZ62 844 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SMIM31A0A1B0GVY4 71 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 WDR91A4D1P6 747 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CXorf49A8MYA2 514 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 H3BRJ5 948 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 DCLK1O15075 740 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PSMD3O43242 534 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ATP9BO43861 1147 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SIN3BO75182 1162 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 PRKCGP05129 697 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 MPOP05164 745 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 HOXA11P31270 313 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SSTR3P32745 418 aaPredicted RBP6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 SESN3P58005 492 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 ADAM17P78536 824 aa6.63□□□□□ -1.35
AC087516.2-201ENST00000558963 CDC16Q13042 620 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms