RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 NDUFS2O75306 463 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 PRKCHP24723 683 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 PTGER3P43115 390 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 RPS24P62847 133 aaKnown RBP22.26■■□□□ 1.15
CRNDE-205ENST00000558952 SLC6A3Q01959 620 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 PTPN20Q4JDL3 420 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 RAP1GAP2Q684P5 730 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 RNF43Q68DV7 783 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 OLFML1Q6UWY5 402 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 KIAA0907Q7Z7F0 614 aaPredicted RBP22.26■■□□□ 1.15
CRNDE-205ENST00000558952 ADIPOR2Q86V24 386 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 LGI2Q8N0V4 545 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 CARNMT1Q8N4J0 409 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 MSANTD4Q8NCY6 345 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 FIBINQ8TAL6 211 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 CYB5D2Q8WUJ1 264 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 PRCCQ92733 491 aaPredicted RBP22.26■■□□□ 1.15
CRNDE-205ENST00000558952 EDEM2Q9BV94 578 aa22.26■■□□□ 1.15
CRNDE-205ENST00000558952 MYO18AQ92614 2054 aaKnown RBP22.26■■□□□ 1.15
CRNDE-205ENST00000558952 DAB1O75553 588 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 ACADMP11310 421 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 TACR2P21452 398 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 CCR1P32246 355 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 CD70P32970 193 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 PITX1P78337 314 aaPredicted RBP22.25■■□□□ 1.15
CRNDE-205ENST00000558952 STPG1Q5TH74 334 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 TAF3Q5VWG9 929 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 SLC26A9Q7LBE3 791 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 TMPRSS6Q8IU80 811 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 SYT12Q8IV01 421 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 CFAP52Q8N1V2 620 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 WFDC5Q8TCV5 224 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 DDX1Q92499 740 aaKnown RBP22.25■■□□□ 1.15
CRNDE-205ENST00000558952 SIPA1Q96FS4 1042 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 PCMTD1Q96MG8 357 aaPredicted RBP22.25■■□□□ 1.15
CRNDE-205ENST00000558952 RXFP3Q9NSD7 469 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 XPO7Q9UIA9 1087 aaKnown RBP22.25■■□□□ 1.15
CRNDE-205ENST00000558952 THADAQ6YHU6 1953 aa22.25■■□□□ 1.15
CRNDE-205ENST00000558952 DMXL1Q9Y485 3027 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 KCNU1A8MYU2 1149 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 F5H5T6 163 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 H0Y626 953 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 LSM8O95777 96 aaKnown RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 DLDP09622 509 aaKnown RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 CDK11BP21127 795 aaKnown RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 CDH5P33151 784 aaPredicted RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 NOS2P35228 1153 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 NME3Q13232 169 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 MTA1Q13330 715 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 METTL3Q86U44 580 aaKnown RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 DEFB119Q8N690 84 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 MKRN2Q9H000 416 aaKnown RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 FAM207AQ9NSI2 230 aaPredicted RBP22.24■■□□□ 1.15
CRNDE-205ENST00000558952 DAAM1Q9Y4D1 1078 aa22.24■■□□□ 1.15
CRNDE-205ENST00000558952 PLXND1Q9Y4D7 1925 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 LUC7L3O95232 432 aaKnown RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 MOCS3O95396 460 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 HLA-EP13747 358 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 COPB1P53618 953 aaKnown RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 POLR2FP61218 127 aaKnown RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 ST8SIA6P61647 398 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 ZNF33AQ06730 810 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 LMAN2Q12907 356 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 ERICH1Q86X53 443 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 ZNF397Q8NF99 534 aaPredicted RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 C18orf8Q96DM3 657 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 MYEOVQ96EZ4 313 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 SPAG5Q96R06 1193 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 NUSAP1Q9BXS6 441 aaKnown RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 GANQ9H2C0 597 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 RRN3Q9NYV6 651 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 STAP1Q9ULZ2 295 aa22.23■■□□□ 1.15
CRNDE-205ENST00000558952 ATXN2Q99700 1313 aaKnown RBP22.23■■□□□ 1.15
CRNDE-205ENST00000558952 LNP1A1A4G5 178 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 PATE3B3GLJ2 98 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 M0QYT0 321 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 ASLP04424 464 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 ITPKAP23677 461 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 CD6P30203 668 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 HOXD12P35452 270 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 MATKP42679 507 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 KLK7P49862 253 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 COPAP53621 1224 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 RNASE9P60153 205 aaKnown RBP22.22■■□□□ 1.15
CRNDE-205ENST00000558952 EIF4EBP2Q13542 120 aaPredicted RBP22.22■■□□□ 1.15
CRNDE-205ENST00000558952 PTPRNQ16849 979 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 TRIM61Q5EBN2 209 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 RABGAP1LQ5R372 815 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 TTC39BQ5VTQ0 682 aaPredicted RBP22.22■■□□□ 1.15
CRNDE-205ENST00000558952 RABEPKQ7Z6M1 372 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 NOP9Q86U38 636 aaKnown RBP22.22■■□□□ 1.15
CRNDE-205ENST00000558952 ZNF677Q86XU0 584 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 CACUL1Q86Y37 369 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 OR2T3Q8NH03 318 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 NAT10Q9H0A0 1025 aaKnown RBP22.22■■□□□ 1.15
CRNDE-205ENST00000558952 TMEM245Q9H330 911 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 FBRSQ9HAH7 460 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 NLRC4Q9NPP4 1024 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 CD93Q9NPY3 652 aa22.22■■□□□ 1.15
CRNDE-205ENST00000558952 ITM2CQ9NQX7 267 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms