RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FOXK1P85037 733 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 CLCA4Q14CN2 919 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
SMAD3-206ENST00000558739 CRTC1Q6UUV9 634 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 USP30Q70CQ3 517 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-206ENST00000558739 AADATQ8N5Z0 425 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 OR4C6Q8NH72 309 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 SLC2A14Q8TDB8 520 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 ARRDC3Q96B67 414 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 MYO19Q96H55 970 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 FAM49BQ9NUQ9 324 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 TJP2Q9UDY2 1190 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 RASAL2Q9UJF2 1139 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
SMAD3-206ENST00000558739 ENTPD2Q9Y5L3 495 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 ATP8B3O60423 1300 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 HHLA1C9JL84 531 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 NOBOXO60393 691 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 PRPF6O94906 941 aaKnown RBP12.41□□□□□ -0.42
SMAD3-206ENST00000558739 GARTP22102 1010 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 DGKAP23743 735 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 MAT2AP31153 395 aaKnown RBP12.41□□□□□ -0.42
SMAD3-206ENST00000558739 SGSHP51688 502 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 PDX1P52945 283 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 TNNC1P63316 161 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 EFEMP1Q12805 493 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 CST6Q15828 149 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 TBR1Q16650 682 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 POM121L1PQ3SYA9 428 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 USP53Q70EK8 1073 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 CLEC14AQ86T13 490 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 ACOT1Q86TX2 421 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 MMAAQ8IVH4 418 aaKnown RBP12.41□□□□□ -0.42
SMAD3-206ENST00000558739 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 OXR1Q8N573 874 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 MAPK15Q8TD08 544 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 HTR3CQ8WXA8 447 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 SGF29Q96ES7 293 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 APOLD1Q96LR9 279 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 MRPL44Q9H9J2 332 aaKnown RBP12.41□□□□□ -0.42
SMAD3-206ENST00000558739 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 NAGPAQ9UK23 515 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 SCML2Q9UQR0 700 aa12.41□□□□□ -0.42
SMAD3-206ENST00000558739 LRRK1Q38SD2 2015 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 LRRC72A6NJI9 287 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 LATO43561 262 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-206ENST00000558739 PPFIA2O75334 1257 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 TNFSF15O95150 251 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 GCNT3O95395 438 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 ITGB2P05107 769 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
SMAD3-206ENST00000558739 POU3F2P20265 443 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-206ENST00000558739 ABCD1P33897 745 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 CHKAP35790 457 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 PSMD8P48556 350 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 CCR5P51681 352 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 MYL6P60660 151 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-206ENST00000558739 DRAP1Q14919 205 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-206ENST00000558739 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 NAPEPLDQ6IQ20 393 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 KLHDC10Q6PID8 442 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 VASH2Q86V25 355 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 FAM26EQ8N5C1 309 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 C12orf29Q8N999 325 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 IFI44Q8TCB0 444 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 FBXO44Q9H4M3 255 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 COMMD8Q9NX08 183 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 ARHGAP20Q9P2F6 1191 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 NCKAP1Q9Y2A7 1128 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
SMAD3-206ENST00000558739 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 TIMM44O43615 452 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 RTN2O75298 545 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 NEBLO76041 1014 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 LDHAP00338 332 aaKnown RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 CYBBP04839 570 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 ADORA2BP29275 332 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 CD70P32970 193 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 CLEC20AQ6ZU45 233 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms