RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 PYDC1Q8WXC3 89 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 PDGFCQ9NRA1 345 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 TKTL1P51854 596 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 TRAPPC5Q8IUR0 188 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 ADGRE3Q9BY15 652 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 NMRK1Q9NWW6 199 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 CCT3P49368 545 aaKnown RBP16.1■□□□□ 0.17
SHISA9-203ENST00000558583 RBBP4Q09028 425 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 ITIH4Q14624 930 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 KIF2CQ99661 725 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 KANSL3Q9P2N6 904 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 PCDHB2Q9Y5E7 798 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 NRKQ7Z2Y5 1582 aa16.1■□□□□ 0.17
SHISA9-203ENST00000558583 H3BN98 237 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ZNF189O75820 626 aaPredicted RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 MPZL3Q6UWV2 235 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 RTL3Q8N8U3 475 aaKnown RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ADAM2Q99965 735 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 RAD21L1Q9H4I0 556 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 CTNNAL1Q9UBT7 734 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 SSU72P8A0A1W2PR75 194 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 TNFRSF21O75509 655 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ITGALP20701 1170 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 TALDO1P37837 337 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 PSEN2P49810 448 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 MAPK7Q13164 816 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 R3HCC1LQ7Z5L2 792 aaKnown RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 SLFN11Q7Z7L1 901 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 KPNA6O60684 536 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 LGR5O75473 907 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 CBX6O95503 412 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 IL12RB1P42701 662 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ABCG1P45844 678 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 GEMP55040 296 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 NR6A1Q15406 480 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 USP20Q9Y2K6 914 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 COQ6Q9Y2Z9 468 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 WDR27A2RRH5 827 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 TIPRLO75663 272 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ZMPSTE24O75844 475 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 FAM131BQ86XD5 332 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 FAM172AQ8WUF8 416 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 KRT35Q92764 455 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 FAM120BQ96EK7 910 aaKnown RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 RNF145Q96MT1 663 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 H3BRB1 525 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 NUP107P57740 925 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 EXOSC10Q01780 885 aaKnown RBP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 CXCL17Q6UXB2 119 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 ZSWIM1Q9BR11 485 aa16.09■□□□□ 0.17
SHISA9-203ENST00000558583 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHISA9-203ENST00000558583 CXCL8P10145 99 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 RASA1P20936 1047 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 GRIK3Q13003 919 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 TMED8Q6PL24 325 aaPredicted RBP16.08■□□□□ 0.17
SHISA9-203ENST00000558583 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 SLC28A3Q9HAS3 691 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 GPAMQ9HCL2 828 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 GRK4P32298 578 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 LRRC74BQ6ZQY2 392 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 ENKURQ8TC29 256 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 ABCG8Q9H221 673 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 ARMC7Q9H6L4 198 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 WDR41Q9HAD4 459 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 CCDC167Q9P0B6 97 aa16.08■□□□□ 0.17
SHISA9-203ENST00000558583 GSAPA4D1B5 854 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 SNUPNO95149 360 aaKnown RBP16.08■□□□□ 0.16
SHISA9-203ENST00000558583 FAM58BPP0C7Q3 252 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 CALB2P22676 271 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 CUL2Q13617 745 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 SCAIQ8N9R8 606 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 C1QTNF7Q9BXJ2 289 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 EPB41L4AQ9HCS5 686 aaPredicted RBP16.08■□□□□ 0.16
SHISA9-203ENST00000558583 IDH3BO43837 385 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 ANXA9O76027 345 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 LHX1P48742 406 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 TBX4P57082 545 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 PLA2G4EQ3MJ16 856 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 RNASE12Q5GAN4 147 aaKnown RBP16.08■□□□□ 0.16
SHISA9-203ENST00000558583 PCP4L1A6NKN8 68 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 ARP10275 920 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 STX4Q12846 297 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 PDIA5Q14554 519 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 SLC25A24Q6NUK1 477 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 CCL16O15467 120 aa16.08■□□□□ 0.16
SHISA9-203ENST00000558583 TEX28O15482 410 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms