RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 TKTL2Q9H0I9 626 aa16.34■□□□□ 0.21
RABGGTA-205ENST00000558534 RETREG1Q9H6L5 497 aa16.34■□□□□ 0.21
RABGGTA-205ENST00000558534 ARHGEF38Q9NXL2 777 aa16.34■□□□□ 0.21
RABGGTA-205ENST00000558534 EBF1Q9UH73 591 aa16.34■□□□□ 0.21
RABGGTA-205ENST00000558534 PLA2G4CQ9UP65 541 aa16.34■□□□□ 0.21
RABGGTA-205ENST00000558534 K7ESF4 209 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 ENDOD1O94919 500 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 LUC7L3O95232 432 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 ASLP04424 464 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 FLT3P36888 993 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 AIF1P55008 147 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 PTP4A2Q12974 167 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 CRY1Q16526 586 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 CNGA4Q8IV77 575 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 VSTM4Q8IW00 320 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 ALLCQ8N6M5 410 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 IL17RCQ8NAC3 791 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 RPRD1AQ96P16 312 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 TBCBQ99426 244 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 TRIM5Q9C035 493 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 CIPCQ9C0C6 399 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 ELOVL2Q9NXB9 296 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 KIAA1522Q9P206 1035 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 GGA2Q9UJY4 613 aa16.33■□□□□ 0.2
RABGGTA-205ENST00000558534 C2CD4BA6NLJ0 364 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 PAGE1O75459 146 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 CLDN11O75508 207 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 LMNAP02545 664 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 GYPCP04921 128 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 PABPC1P11940 636 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 TDGF1P13385 188 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 HOXB2P14652 356 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 POLR2EP19388 210 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 SLC6A4P31645 630 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 CASP14P31944 242 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 ST8SIA6P61647 398 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 C2CD6Q53TS8 623 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 CARNMT1Q8N4J0 409 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 OR8K1Q8NGG5 319 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 RXFP2Q8WXD0 754 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 CFAP57Q96MR6 1250 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 PIGVQ9NUD9 493 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 STIM2Q9P246 746 aa16.32■□□□□ 0.2
RABGGTA-205ENST00000558534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 AXIN1O15169 862 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 SYNCRIPO60506 623 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 LILRB5O75023 590 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 NNMTP40261 264 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 ZNF143P52747 638 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 CDH4P55283 916 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 PITX1P78337 314 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 ZNF177Q13360 481 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 BNIPLQ7Z465 357 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 KDM1BQ8NB78 822 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 SPACA7Q96KW9 195 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 PRMT1Q99873 361 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 GABRG3Q99928 467 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 CNPY3Q9BT09 278 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 FAM86C1Q9NVL1 165 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 BCCIPQ9P287 314 aaKnown RBP eCLIP16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 LCMT1Q9UIC8 334 aa16.31■□□□□ 0.2
RABGGTA-205ENST00000558534 TMCO5BA8MYB1 307 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 PRRT4C9JH25 899 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 HLA-FP30511 346 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 ATP11AP98196 1134 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 AUHQ13825 339 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 CDO1Q16878 200 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 RNF219Q5W0B1 726 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 KIAA0907Q7Z7F0 614 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 EMC1Q8N766 993 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 FAM172AQ8WUF8 416 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 NTAN1Q96AB6 310 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 PRICKLE1Q96MT3 831 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 MCEEQ96PE7 176 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 HHIPQ96QV1 700 aa16.3■□□□□ 0.2
RABGGTA-205ENST00000558534 SIK2Q9H0K1 926 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms