RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 RBP5P82980 135 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 FAAP100Q0VG06 881 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 SQLEQ14534 574 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PYDC2Q56P42 97 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PAGE2Q7Z2X7 111 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 CLNKQ7Z7G1 428 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 ART4Q93070 314 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 SIK2Q9H0K1 926 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PNPLA8Q9NP80 782 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 TRMT13Q9NUP7 481 aaKnown RBP12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 MTF2Q9Y483 593 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 A0A0G2JPF8 293 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 HNRNPCL3B7ZW38 293 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 LSM8O95777 96 aaKnown RBP12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 HNRNPCL4P0DMR1 293 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 TPTEP56180 551 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 CLEC16AQ2KHT3 1053 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 TTLL9Q3SXZ7 439 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 GALNTL6Q49A17 601 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 DUPD1Q68J44 220 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 CRTC3Q6UUV7 619 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 IPMKQ8NFU5 416 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 HTRA1Q92743 480 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 ADPRHL2Q9NX46 363 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 FAM92AA1XBS5 289 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 TCP10L2B9ZVM9 353 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PAEPP09466 180 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 SOAT1P35610 550 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 COPZ1P61923 177 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 STX4Q12846 297 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 PTRHD1Q6GMV3 140 aaKnown RBP12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 GALNT6Q8NCL4 622 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 Q96MT0 163 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 AGPAT3Q9NRZ7 376 aa12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSPG4P12-201ENST00000558282 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 LCP1P13796 627 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 FGFR3P22607 806 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GNL1P36915 607 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GRIA3P42263 894 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SLC16A1P53985 500 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 EHD1Q9H4M9 534 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 REEP1Q9H902 201 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ZNF302Q9NR11 478 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GABBR1Q9UBS5 961 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PCDHA10Q9Y5I2 948 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 DEPDC5O75140 1603 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SGPL1O95470 568 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 IFNA16P05015 189 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 DNAJB2P25686 324 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PSEN1P49768 467 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 CDC42P60953 191 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PAGE2BQ5JRK9 111 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ISLR2Q6UXK2 745 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 FRMD7Q6ZUT3 714 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ZNF540Q8NDQ6 660 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 VCPIP1Q96JH7 1222 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 DENND2DQ9H6A0 471 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 MLXQ9UH92 298 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GLRBP48167 497 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 CDK9P50750 372 aaKnown RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PWP1Q13610 501 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PHKG1Q16816 387 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SPANXN3Q5MJ09 141 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 TAF8Q7Z7C8 310 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 NIM1KQ8IY84 436 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 OR8H1Q8NGG4 311 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ACTL9Q8TC94 416 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 FAR1Q8WVX9 515 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ELOVL6Q9H5J4 265 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 PREBQ9HCU5 417 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GNEQ9Y223 722 aaKnown RBP12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 ITM2BQ9Y287 266 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 GMPPBQ9Y5P6 360 aa12.01□□□□□ -0.49
CSPG4P12-201ENST00000558282 KBTBD13C9JR72 458 aa12□□□□□ -0.49
CSPG4P12-201ENST00000558282 EXTL3O43909 919 aa12□□□□□ -0.49
CSPG4P12-201ENST00000558282 VPS26AO75436 327 aa12□□□□□ -0.49
CSPG4P12-201ENST00000558282 TGDSO95455 350 aa12□□□□□ -0.49
CSPG4P12-201ENST00000558282 TFRCP02786 760 aaKnown RBP12□□□□□ -0.49
CSPG4P12-201ENST00000558282 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
CSPG4P12-201ENST00000558282 TCF4P15884 667 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms