RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 MFSD7Q6UXD7 560 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 BBS12Q6ZW61 710 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CYP4V2Q6ZWL3 525 aaPredicted RBP12.81□□□□□ -0.36
TPM1-209ENST00000558072 MTSS1LQ765P7 747 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
TPM1-209ENST00000558072 SMRP1Q8NCR6 262 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 TTC16Q8NEE8 873 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ZSCAN18Q8TBC5 510 aaPredicted RBP12.81□□□□□ -0.36
TPM1-209ENST00000558072 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 RAPGEF5Q92565 580 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 FGF13Q92913 245 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 WBP2Q969T9 261 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 RNF157Q96PX1 679 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CYP2S1Q96SQ9 504 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 PSMB7Q99436 277 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ZYG11BQ9C0D3 744 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 BRD8Q9H0E9 1235 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 SIK2Q9H0K1 926 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 ZFP14Q9HCL3 533 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CALCOCO1Q9P1Z2 691 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 CFAP97Q9P2B7 532 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 HS3ST4Q9Y661 456 aa12.81□□□□□ -0.36
TPM1-209ENST00000558072 HELZP42694 1942 aaKnown RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 hCG_1818297A0A087WSY0 165 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 CTAGE15A4D2H0 777 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 WASH4PA8MWX3 477 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 E9PAM4 449 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 KRIT1O00522 736 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 CTAGE8P0CG41 777 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 RHOQP17081 205 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 TACR2P21452 398 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 HOXC13P31276 330 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 MARCKSL1P49006 195 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 MAPKAPK2P49137 400 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 SEMA3BQ13214 749 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 SMAD4Q13485 552 aaKnown RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 AUHQ13825 339 aaKnown RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 C5orf22Q49AR2 442 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 MS4A13Q5J8X5 152 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 TMCO3Q6UWJ1 677 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 CTAGE6Q86UF2 777 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 CREG2Q8IUH2 290 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 DENND1CQ8IV53 801 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 CTAGE4Q8IX94 777 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 NPAS3Q8IXF0 933 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 TSC1Q92574 1164 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 P3H4Q92791 437 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 HLA-CQ95604 372 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 CSPG4P5Q96PW8 444 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 MYADMQ96S97 322 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 KCTD15Q96SI1 283 aaPredicted RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 GKN1Q9NS71 199 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 SMPD4Q9NXE4 827 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 AGO1Q9UL18 857 aaKnown RBP12.8□□□□□ -0.36
TPM1-209ENST00000558072 NR2E1Q9Y466 385 aa12.8□□□□□ -0.36
TPM1-209ENST00000558072 IGLV3-10A0A075B6K4 115 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 C3orf70A6NLC5 250 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 DRGXA6NNA5 263 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 PI4K2BG5E9Z4 385 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 MBTPS2O43462 519 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CST8O60676 142 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 SRGAP2O75044 1071 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CLDN11O75508 207 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 LRIG2O94898 1065 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 APOC2P02655 101 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 IRF1P10914 325 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 IL9P15248 144 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 TCF4P15884 667 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 GBP2P32456 591 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 KCNQ1P51787 676 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CDH4P55283 916 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 ZNF33AQ06730 810 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 USP4Q13107 963 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 NR1H3Q13133 447 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 ZNF211Q13398 564 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 XRCC4Q13426 336 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 PDGFRLQ15198 375 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CCNG2Q16589 344 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 MPPE1Q53F39 396 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 KAZNQ674X7 775 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 SLC9A4Q6AI14 798 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 TXNRD3NBQ6F5E7 133 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 RWDD4Q6NW29 188 aaKnown RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 Q6ZNB5 142 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CHST9Q7L1S5 443 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms