RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FNBP1Q96RU3 617 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 HAPLN3Q96S86 360 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CITED2Q99967 270 aaPredicted RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 XPO4Q9C0E2 1151 aaKnown RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 TMEM168Q9H0V1 697 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 SMOC2Q9H3U7 446 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 ZNF552Q9H707 407 aaPredicted RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 TRPV4Q9HBA0 871 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 PFDN4Q9NQP4 134 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 RXFP3Q9NSD7 469 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 THAP1Q9NVV9 213 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 WDR35Q9P2L0 1181 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 NKX1-2Q9UD57 310 aaPredicted RBP4.06□□□□□ -1.76
TDP1-217ENST00000557782 CDH22Q9UJ99 828 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 SLC12A4Q9UP95 1085 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 NR2E1Q9Y466 385 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 CCL27Q9Y4X3 112 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 PCDHA5Q9Y5H7 936 aa4.06□□□□□ -1.76
TDP1-217ENST00000557782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.06□□□□□ -1.76
TDP1-217ENST00000557782 FRMD3A2A2Y4 597 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PMS2P1A4D2B8 440 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 GLOD5A6NK44 160 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 C3orf70A6NLC5 250 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 TTC36A6NLP5 189 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 GRM8O00222 908 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 STC2O76061 302 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PRSS23O95084 383 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 CSF1RP07333 972 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 C1SP09871 688 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 FAM200BP0CF97 657 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 MYBL1P10243 752 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 SP100P23497 879 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 IGFBP6P24592 240 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 RPL13P26373 211 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 ADORA2AP29274 412 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 CD6P30203 668 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 TTKP33981 857 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 KRT2P35908 639 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PBX3P40426 434 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 NRIP1P48552 1158 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 NDUFV1P49821 464 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 CDR1P51861 262 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 RRP1P56182 461 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 TIRAPP58753 221 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 BPIFB3P59826 476 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 EIF4A1P60842 406 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 RPL15P61313 204 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 PSMC6P62333 389 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 EFNB1P98172 346 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 TLE3Q04726 772 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 IRF3Q14653 427 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 ADIPOQQ15848 244 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 TBR1Q16650 682 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 DPCR1Q3MIW9 517 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 MMEL1Q495T6 779 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PREPLQ4J6C6 727 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 ADALQ6DHV7 355 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 ISM2Q6H9L7 571 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 DRICH1Q6PGQ1 229 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 DCLRE1AQ6PJP8 1040 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 NFXL1Q6ZNB6 911 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 GPRIN1Q7Z2K8 1008 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 RALYLQ86SE5 291 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 ZNF605Q86T29 641 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 DTX1Q86Y01 620 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 ABRAQ8N0Z2 381 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 KLHL36Q8N4N3 616 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 TDRD5Q8NAT2 981 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 SHCBP1Q8NEM2 672 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 GPR150Q8NGU9 434 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PIGOQ8TEQ8 1089 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 NPIPB3Q92617 1050 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 MARS2Q96GW9 593 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 PGAM5Q96HS1 289 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 VPS50Q96JG6 964 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 YTHDC1Q96MU7 727 aaKnown RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 RAB3IPQ96QF0 476 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 CPPED1Q9BRF8 314 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 C17orf80Q9BSJ5 609 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 KLHL4Q9C0H6 718 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 TTC12Q9H892 705 aaPredicted RBP4.05□□□□□ -1.76
TDP1-217ENST00000557782 TRIM36Q9NQ86 728 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.05□□□□□ -1.76
TDP1-217ENST00000557782 DECR2Q9NUI1 292 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 ADAM29Q9UKF5 820 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 ODF2LQ9ULJ1 636 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 SORCS3Q9UPU3 1222 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 SNX14Q9Y5W7 946 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 SESN1Q9Y6P5 492 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 PMF1-BGLAPU3KQ54 211 aa4.05□□□□□ -1.76
TDP1-217ENST00000557782 SPATA31A3Q5VYP0 1347 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 DRGXA6NNA5 263 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 EIF3CLB5ME19 914 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 CTDSP2O14595 271 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 ZNF213O14771 459 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 PER2O15055 1255 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 WDR46O15213 610 aaKnown RBP4.04□□□□□ -1.76
TDP1-217ENST00000557782 WIPF1O43516 503 aa4.04□□□□□ -1.76
TDP1-217ENST00000557782 GOSR1O95249 250 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms