RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RGS7P49802 495 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 KIF19Q2TAC6 998 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 RFWD3Q6PCD5 774 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 UNC45BQ8IWX7 931 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 BIRC7Q96CA5 298 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 BTBD1Q9H0C5 482 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 TM9SF3Q9HD45 589 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 TOR4AQ9NXH8 423 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 SNX11Q9Y5W9 270 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 DSPP15924 2871 aaKnown RBP16.58■□□□□ 0.25
SCFD1-224ENST00000557713 PIK3R2O00459 728 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 FLRT2O43155 660 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 IRAK2O43187 625 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 ACSL4O60488 711 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 SEMA4FO95754 770 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 DNTTP04053 509 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 POLR2EP19388 210 aaKnown RBP16.58■□□□□ 0.24
SCFD1-224ENST00000557713 SLC11A2P49281 568 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 NUGGCQ68CJ6 796 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 FIBINQ8TAL6 211 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 LMO3Q8TAP4 145 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 RHBDD1Q8TEB9 315 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 CLEC4CQ8WTT0 213 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 SNX19Q92543 992 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 TTC17Q96AE7 1141 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 MYO19Q96H55 970 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 CDC6Q99741 560 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 ORAI3Q9BRQ5 295 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 SGK2Q9HBY8 427 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 METTL14Q9HCE5 456 aaKnown RBP16.58■□□□□ 0.24
SCFD1-224ENST00000557713 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCFD1-224ENST00000557713 ANKRD6Q9Y2G4 727 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 PCDHB4Q9Y5E5 795 aa16.58■□□□□ 0.24
SCFD1-224ENST00000557713 FREM2Q5SZK8 3169 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 PLXNB3Q9ULL4 1909 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 SMC2O95347 1197 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 LTFP02788 710 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 FYNP06241 537 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 ATXN1LP0C7T5 689 aaKnown RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 CD27P26842 260 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 GRIA4P48058 902 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 TBX4P57082 545 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 SUZ12Q15022 739 aaKnown RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 STILQ15468 1287 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 NADSYN1Q6IA69 706 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 TMPRSS7Q7RTY8 843 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 GOLGA1Q92805 767 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 KAT5Q92993 513 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 MYEOVQ96EZ4 313 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 HSFY1Q96LI6 401 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 NT5C1BQ96P26 610 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 RSPH9Q9H1X1 276 aaPredicted RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 MTG2Q9H4K7 406 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 INTS6Q9UL03 887 aaKnown RBP16.57■□□□□ 0.24
SCFD1-224ENST00000557713 BTBD3Q9Y2F9 522 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 ZFYVE26Q68DK2 2539 aa16.57■□□□□ 0.24
SCFD1-224ENST00000557713 KCNK3O14649 394 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 FSBPO95073 299 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 CALCAP01258 141 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 BRD2P25440 801 aaKnown RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 RPL34P49207 117 aaKnown RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 TEAD4Q15561 434 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 ZNF776Q68DI1 518 aaPredicted RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 FCRL2Q96LA5 508 aaPredicted RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 MRGPRX3Q96LB0 322 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 CCDC86Q9H6F5 360 aaKnown RBP16.56■□□□□ 0.24
SCFD1-224ENST00000557713 STIM2Q9P246 746 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 GPSM3Q9Y4H4 160 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 LAMA5O15230 3695 aa16.56■□□□□ 0.24
SCFD1-224ENST00000557713 ITPR1Q14643 2758 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 M0QYV0 167 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 FBXO21O94952 628 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 IGHV4-34P06331 123 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 CTSKP43235 329 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 COL9A2Q14055 689 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 ARID5BQ14865 1188 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 HNRNPA1L2Q32P51 320 aaKnown RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 KCNT1Q5JUK3 1230 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 USP30Q70CQ3 517 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 MFN1Q8IWA4 741 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 PPM1KQ8N3J5 372 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 KDM1BQ8NB78 822 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 HJURPQ8NCD3 748 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 DQX1Q8TE96 717 aaKnown RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 IGSF8Q969P0 613 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 SLC39A13Q96H72 371 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-224ENST00000557713 CEP63Q96MT8 703 aa16.55■□□□□ 0.24
SCFD1-224ENST00000557713 MIS12Q9H081 205 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms