RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 METTL5Q9NRN9 209 aaKnown RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 TMEM59LQ9UK28 342 aa12.95□□□□□ -0.34
SLIRP-211ENST00000557623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.346e-18■□□□□ 8
SLIRP-211ENST00000557623 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
SLIRP-211ENST00000557623 FAM170AA1A519 330 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 F5H5T6 163 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 NPC1O15118 1278 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 TRIM24O15164 1050 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 TIMM44O43615 452 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 TBL1XO60907 577 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 LILRB5O75023 590 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-211ENST00000557623 APBB3O95704 486 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 TACR2P21452 398 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 CNR2P34972 360 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 DGKEP52429 567 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 ZBED6P86452 979 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 EIF4HQ15056 248 aaKnown RBP12.94□□□□□ -0.34
SLIRP-211ENST00000557623 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-211ENST00000557623 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 MON1BQ7L1V2 547 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 CHSY1Q86X52 802 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 CCDC33Q8N5R6 958 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SLIRP-211ENST00000557623 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 WFIKKN2Q8TEU8 576 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 SYT11Q9BT88 431 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 R4GN57 208 aa12.94□□□□□ -0.34
SLIRP-211ENST00000557623 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 PRRT4C9JH25 899 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 KRT3P12035 628 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 GZMAP12544 262 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 HNRNPLP14866 589 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 NTSR1P30989 418 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 SDC4P31431 198 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 FLT3P36888 993 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 FNTBP49356 437 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 CXCR3P49682 368 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 PTP4A2Q12974 167 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 TRIM14Q14142 442 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 CRY1Q16526 586 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 TTC39BQ5VTQ0 682 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 RAP1GAP2Q684P5 730 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 RNF43Q68DV7 783 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 VPS36Q86VN1 386 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 WDR5BQ86VZ2 330 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 MFN1Q8IWA4 741 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 AHI1Q8N157 1196 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 WNT2BQ93097 391 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 TBCBQ99426 244 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 ARHGEF38Q9NXL2 777 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 STIM2Q9P246 746 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 EBF1Q9UH73 591 aa12.93□□□□□ -0.34
SLIRP-211ENST00000557623 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 LUC7L2Q9Y383 392 aaKnown RBP12.93□□□□□ -0.34
SLIRP-211ENST00000557623 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 ANKRD62A6NC57 917 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 SIGLEC16A6NMB1 481 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 SGK1O00141 431 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 DESP17661 470 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 SGSHP51688 502 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 RPS24P62847 133 aaKnown RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 CDH18Q13634 790 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 GEN1Q17RS7 908 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 RABGAP1LQ5R372 815 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 OTUD1Q5VV17 481 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 HEATR6Q6AI08 1181 aaKnown RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 DNAJC24Q6P3W2 148 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 ZNF571Q7Z3V5 609 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms