RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TNS4Q8IZW8 715 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 ZNF567Q8N184 647 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 GPRC5AQ8NFJ5 357 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 RNF139Q8WU17 664 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 STMN2Q93045 179 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 ZNF408Q9H9D4 720 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 TMEM216Q9P0N5 145 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 STOML1Q9UBI4 398 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-218ENST00000557439 SDR42E2A6NKP2 422 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 USP1O94782 785 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 SLC25A3Q00325 362 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 PDE1BQ01064 536 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 PCLAFQ15004 111 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 LRRC74BQ6ZQY2 392 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 EFCAB3Q8N7B9 438 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 ARRDC4Q8NCT1 418 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 OR52K1Q8NGK4 314 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 FCRL3Q96P31 734 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-218ENST00000557439 PANX3Q96QZ0 392 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 APOL2Q9BQE5 337 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 TUBB6Q9BUF5 446 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 E7ENQ6 273 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 I6L893 689 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-218ENST00000557439 M0QYT0 321 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 ITGA2BP08514 1039 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 LINGO3P0C6S8 592 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 VHLP40337 213 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 PEX19P40855 299 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 MATKP42679 507 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 RIPOR1Q6ZS17 1223 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 TRIM42Q8IWZ5 723 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 AGR3Q8TD06 166 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 DNAJB3Q8WWF6 145 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 VTA1Q9NP79 307 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 PLA2G4CQ9UP65 541 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SNX10Q9Y5X0 201 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 ZFXP17010 805 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SLC1A6P48664 564 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SLC34A1Q06495 639 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 DLG2Q15700 870 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 DPP9Q86TI2 863 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 UNC93AQ86WB7 457 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 RASSF3Q86WH2 238 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 ZDHHC17Q8IUH5 632 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 PLD6Q8N2A8 252 aaKnown RBP18.21■□□□□ 0.51
XRCC3-218ENST00000557439 LRRC52Q8N7C0 313 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SYT15Q9BQS2 421 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-218ENST00000557439 CAB39LQ9H9S4 337 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 PIGVQ9NUD9 493 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 MKS1Q9NXB0 559 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SLC7A8Q9UHI5 535 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 RPS6KL1Q9Y6S9 549 aa18.21■□□□□ 0.51
XRCC3-218ENST00000557439 SPECC1L-ADORA2AF8WAN1 911 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 GOLGA8TH3BQL2 631 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 PIRO00625 290 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 PLIN3O60664 434 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 SERPINB9P50453 376 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 CBLBQ13191 982 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 TUBB3Q13509 450 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 TSNAXIP1Q2TAA8 658 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 NOTUMQ6P988 496 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 PID1Q7Z2X4 250 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 ZNF410Q86VK4 478 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 TMPRSS6Q8IU80 811 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 SCUBE1Q8IWY4 988 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 ULK2Q8IYT8 1036 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 AGAP2Q99490 1192 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 YIPF3Q9GZM5 350 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 THAP1Q9NVV9 213 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 ZFATQ9P243 1243 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 TAGLN3Q9UI15 199 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 COL1A2P08123 1366 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 DYNC1LI2O43237 492 aaPredicted RBP18.2■□□□□ 0.5
XRCC3-218ENST00000557439 ZMPSTE24O75844 475 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 CD1EP15812 388 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 RALGPS1Q5JS13 557 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 STEAP4Q687X5 459 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 LRRC8BQ6P9F7 803 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 MARK2Q7KZI7 788 aaKnown RBP18.2■□□□□ 0.5
XRCC3-218ENST00000557439 CRYBG2Q8N1P7 616 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 CFAP61Q8NHU2 1237 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
XRCC3-218ENST00000557439 RPL26L1Q9UNX3 145 aaKnown RBP18.2■□□□□ 0.5
XRCC3-218ENST00000557439 MEIS3P2A8K0S8 358 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 NRP1O14786 923 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 ALDH1A2O94788 518 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 LMNAP02545 664 aaKnown RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 GSTA2P09210 222 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SLC25A52Q3SY17 297 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SPNS2Q8IVW8 549 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 ACVR1CQ8NER5 493 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 SH3TC2Q8TF17 1288 aa18.19■□□□□ 0.5
XRCC3-218ENST00000557439 ZFP42Q96MM3 310 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms