RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 NPR3P17342 541 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 COPZ1P61923 177 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 OTOP1Q7RTM1 612 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 STRA8Q7Z7C7 330 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 SLC26A11Q86WA9 606 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CCDC185Q8N715 623 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 CPNE1Q99829 537 aa8.55□□□□□ -1.04
CHD8-213ENST00000557364 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD8-213ENST00000557364 GLTPD2A6NH11 291 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 TRIM49D1C9J1S8 452 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 STAU1O95793 577 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 APODP05090 189 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ENO1P06733 434 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 SOX6P35712 828 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SKIV2L2P42285 1042 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 GPR15P49685 360 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MSLNQ13421 630 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 DDX39BQ13838 428 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 APOBEC3HQ6NTF7 200 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 BTNL9Q6UXG8 535 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ADCK1Q86TW2 530 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 VSIG10LQ86VR7 867 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CXorf40BQ96DE9 158 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 KLHL3Q9UH77 587 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 RUVBL2Q9Y230 463 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 ZNF711Q9Y462 761 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 TEX28O15482 410 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 HDCP19113 662 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MAP4K3Q8IVH8 894 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ACTRT1Q8TDG2 376 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 DEPDC7Q96QD5 511 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CBWD1Q9BRT8 395 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 IL22Q9GZX6 179 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 NDOR1Q9UHB4 597 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD8-213ENST00000557364 FGFR1P11362 822 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PBLDP30039 288 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 KDSRQ06136 332 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CYTH1Q15438 398 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 LONRF1Q17RB8 773 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SLC30A10Q6XR72 485 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 LPCAT1Q8NF37 534 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 NPHS2Q9NP85 383 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 GPRC5CQ9NQ84 441 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MFHAS1Q9Y4C4 1052 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PCDHA3Q9Y5H8 950 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PARP4Q9UKK3 1724 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 WWP2O00308 870 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PGAM1P18669 254 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 TTPAP49638 278 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SEC23AQ15436 765 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 TRIM71Q2Q1W2 868 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 VSTM1Q6UX27 236 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 LPCAT2Q7L5N7 544 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PPP1R10Q96QC0 940 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 FAM126AQ9BYI3 521 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 HIPK3Q9H422 1215 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 DNTTP04053 509 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MDH1P40925 334 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 RGS1Q08116 209 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 FAM131BQ86XD5 332 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SPPL2BQ8TCT7 592 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MED8Q96G25 268 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CNDP1Q96KN2 507 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 ADAM21Q9UKJ8 722 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 GLI1P08151 1106 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SELPP16109 830 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ADCYAP1R1P41586 468 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CHI3L2Q15782 390 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PSRC1Q6PGN9 363 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 ZNF614Q8N883 585 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PRMT1Q99873 361 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ARHGAP28Q9P2N2 729 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ACSL4O60488 711 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 PPP1R37O75864 691 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ENO2P09104 434 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 MAGEA9P43362 315 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SLC16A1P53985 500 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 RAD23AP54725 363 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 CSE1LP55060 971 aaKnown RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 ADRM1Q16186 407 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 MROH9Q5TGP6 573 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 SPOCD1Q6ZMY3 1216 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 HASPINQ8TF76 798 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 HTR3CQ8WXA8 447 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 AGPAT5Q9NUQ2 364 aa8.54□□□□□ -1.04
CHD8-213ENST00000557364 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
CHD8-213ENST00000557364 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
CHD8-213ENST00000557364 OR6A2O95222 327 aa8.53□□□□□ -1.04
CHD8-213ENST00000557364 ANXA5P08758 320 aa8.53□□□□□ -1.04
CHD8-213ENST00000557364 PTPN1P18031 435 aaKnown RBP8.53□□□□□ -1.04
CHD8-213ENST00000557364 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
CHD8-213ENST00000557364 NUP62P37198 522 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms