RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 CCDC157Q569K6 752 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
RDH11-210ENST00000557331 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 TMEM215Q68D42 235 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 ARHGAP17Q68EM7 881 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 FAM173BQ6P4H8 233 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 ADIPOR2Q86V24 386 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 IQCHQ86VS3 1027 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 LSMEM2Q8N112 164 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 SCML4Q8N228 414 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 OR2T34Q8NGX1 318 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 GANCQ8TET4 914 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 CNDP2Q96KP4 475 aaKnown RBP10.65□□□□□ -0.7
RDH11-210ENST00000557331 IPO9Q96P70 1041 aaKnown RBP10.65□□□□□ -0.7
RDH11-210ENST00000557331 PABPC3Q9H361 631 aaKnown RBP10.65□□□□□ -0.7
RDH11-210ENST00000557331 ABCC13Q9NSE7 274 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 FBXL12Q9NXK8 326 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 HMGXB4Q9UGU5 601 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 ADAMTS1Q9UHI8 967 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 GGA2Q9UJY4 613 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 KIAA1257Q9ULG3 409 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 TRAF3IP3Q9Y228 551 aa10.65□□□□□ -0.7
RDH11-210ENST00000557331 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 MOCS3O95396 460 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 PSMC2P35998 433 aaKnown RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 TKTL1P51854 596 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 YWHAEP62258 255 aaKnown RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 DLG4P78352 724 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 SEMG2Q02383 582 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 HNRNPA1L2Q32P51 320 aaKnown RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 HS1BP3Q53T59 392 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 CEP135Q66GS9 1140 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 MBLAC2Q68D91 279 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 KRT39Q6A163 491 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 SHC4Q6S5L8 630 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 PIGZQ86VD9 579 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 FMNL3Q8IVF7 1028 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 PIP4K2CQ8TBX8 421 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 SORCS1Q8WY21 1168 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 RFFLQ8WZ73 363 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 TTC17Q96AE7 1141 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 TMEM176AQ96HP8 235 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 FCRL3Q96P31 734 aaPredicted RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 TWNKQ96RR1 684 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 PPP1R9BQ96SB3 815 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 ARID3AQ99856 593 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 OMDQ99983 421 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 KCTD10Q9H3F6 313 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 LRRC4Q9HBW1 653 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 TMEM8AQ9HCN3 771 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 ABCB8Q9NUT2 735 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 HESX1Q9UBX0 185 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
RDH11-210ENST00000557331 ARID1BQ8NFD5 2236 aaPredicted RBP10.64□□□□□ -0.71
RDH11-210ENST00000557331 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 XPO1O14980 1071 aaKnown RBP10.63□□□□□ -0.71
RDH11-210ENST00000557331 ADH1BP00325 375 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 IGHV4-34P06331 123 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 SRPRAP08240 638 aaKnown RBP10.63□□□□□ -0.71
RDH11-210ENST00000557331 CKMT2P17540 419 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 CD58P19256 250 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 NNMTP40261 264 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 GALCP54803 685 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 MCCD1P59942 119 aaPredicted RBP10.63□□□□□ -0.71
RDH11-210ENST00000557331 RHDQ02161 417 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 STK4Q13043 487 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 TARDBPQ13148 414 aaKnown RBP eCLIP10.63□□□□□ -0.71
RDH11-210ENST00000557331 CUL4BQ13620 913 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 SPOPLQ6IQ16 392 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 FBXL19Q6PCT2 694 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 SND1Q7KZF4 910 aaKnown RBP eCLIP10.63□□□□□ -0.712e-7■■■■□ 24.9
RDH11-210ENST00000557331 CACUL1Q86Y37 369 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 MFSD2AQ8NA29 543 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 FIBINQ8TAL6 211 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 CYB5D2Q8WUJ1 264 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 TSC1Q92574 1164 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 ORAI3Q9BRQ5 295 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 BLZF1Q9H2G9 400 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 AASDHPPTQ9NRN7 309 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 EVA1BQ9NVM1 165 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 CLEC4EQ9ULY5 219 aa10.63□□□□□ -0.71
RDH11-210ENST00000557331 ATMQ13315 3056 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 EDDM13A0A1B0GTR0 161 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 TLR4O00206 839 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 KCNK3O14649 394 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 RNGTTO60942 597 aaKnown RBP10.62□□□□□ -0.71
RDH11-210ENST00000557331 SETSIPP0DME0 302 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 GOT1P17174 413 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 C5AR1P21730 350 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 NR2F2P24468 414 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 AFMP43652 599 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 ME1P48163 572 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 ACADVLP49748 655 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 CCDC15Q0P6D6 951 aa10.62□□□□□ -0.71
RDH11-210ENST00000557331 BST2Q10589 180 aaKnown RBP10.62□□□□□ -0.71
RDH11-210ENST00000557331 CST6Q15828 149 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms