RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 GCP02774 474 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RARGP13631 454 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 TFE3P19532 575 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SLC25A25Q6KCM7 469 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 DCP1BQ8IZD4 617 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ITFG1Q8TB96 612 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 C17orf75Q9HAS0 396 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ERP29P30040 261 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RBM34P42696 430 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 KCTD21Q4G0X4 260 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 DEFB107AQ8IZN7 70 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 KIF2BQ8N4N8 673 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM168Q9H0V1 697 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 NR2F6P10588 404 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF614Q8N883 585 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 TNFAIP8L1Q8WVP5 186 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SCGB3A2Q96PL1 93 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 TTYH1Q9H313 450 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 AASSQ9UDR5 926 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 KIAA1257Q9ULG3 409 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SLC9A8Q9Y2E8 581 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SLC11A2P49281 568 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 RBBP4Q09028 425 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PAPD7Q5XG87 772 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PGBD2Q6P3X8 592 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SIX5Q8N196 739 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CCDC54Q8NEL0 328 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 LOC100506127A0A0U1RQW1 187 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 HOXC9P31274 260 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PRCPP42785 496 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TNK2Q07912 1038 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MFSD14CQ5VZR4 134 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SHQ1Q6PI26 577 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PHC3Q8NDX5 983 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GDPD5Q8WTR4 605 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ATXN2LQ8WWM7 1075 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 EIF4E1BA6NMX2 242 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 INPP4BO15327 924 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CSH1P0DML2 217 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CSH2P0DML3 217 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MNDAP41218 407 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SGO1Q5FBB7 561 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CDC42BPGQ6DT37 1551 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 RPS6KA4O75676 772 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GSTT2BP0CG30 244 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PDGFRAP16234 1089 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 NEDD8Q15843 81 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 LHFPL3Q86UP9 236 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 DNAAF5Q86Y56 855 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 DNAJA4Q8WW22 397 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF669Q96BR6 464 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF512Q96ME7 567 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MED28Q9H204 178 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 DSEQ9UL01 958 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MSL3P1P0C860 447 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 BNIP2Q12982 314 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 FBXO31Q5XUX0 539 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TDRPQ86YL5 185 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MCEEQ96PE7 176 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TDRD1Q9BXT4 1180 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 POLR3FQ9H1D9 316 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TTC26A0AVF1 554 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MATN2O00339 956 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TPST1O60507 370 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ATP6V1G2O95670 118 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 EGFRP00533 1210 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CXCR2P25025 360 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MTSS1LQ765P7 747 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PAGE2Q7Z2X7 111 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SLC26A11Q86WA9 606 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF518BQ9C0D4 1074 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CDH19Q9H159 772 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ACOT9Q9Y305 439 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PPEF2O14830 753 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GRB14Q14449 540 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 YTHDF3Q7Z739 585 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 OAFQ86UD1 273 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ATP6V0D2Q8N8Y2 350 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 HPS4Q9NQG7 708 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 A0A1B0GTH6 734 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 KCNH1O95259 989 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PGS1Q32NB8 556 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 LXNQ9BS40 222 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SCUBE2Q9NQ36 999 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 NR6A1Q15406 480 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 VPS26BQ4G0F5 336 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 STK32AQ8WU08 396 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TSPAN18Q96SJ8 248 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms