RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 WBP2Q969T9 261 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 ZWILCHQ9H900 591 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
FOXN3-212ENST00000556541 PCSK1NQ9UHG2 260 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 TTC7AQ9ULT0 858 aaPredicted RBP11.64□□□□□ -0.55
FOXN3-212ENST00000556541 NEU3Q9UQ49 428 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 COL4A3Q01955 1670 aa11.64□□□□□ -0.55
FOXN3-212ENST00000556541 SYNJ2BP-COX16A0A087WUM0 186 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 CXorf51AA0A1B0GTR3 108 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 A0A1B0GVM2 712 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TYW5A2RUC4 315 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TCAF2A6NFQ2 919 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 E9PAM4 449 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ARNTLO00327 626 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 HOXC11O43248 304 aaPredicted RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 LRIG2O94898 1065 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 NFATC1O95644 943 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 PENKP01210 267 aaPredicted RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 HMBSP08397 361 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 IRF1P10914 325 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 RHOQP17081 205 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TCP1P17987 556 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 EIF2DP41214 584 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 VIPR2P41587 438 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 IFNAR2P48551 515 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 OXCT1P55809 520 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 DPYSQ14117 519 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 DPYSL3Q14195 570 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 EML3Q32P44 896 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 MPPE1Q53F39 396 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TFDP3Q5H9I0 405 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 DAB2IPQ5VWQ8 1189 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 FBXL22Q6P050 247 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 PARM1Q6UWI2 310 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ZNF783Q6ZMS7 281 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 CHSY1Q86X52 802 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 CPNE8Q86YQ8 564 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 BBS7Q8IWZ6 715 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ADGRG2Q8IZP9 1017 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 LZTR1Q8N653 840 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ALG3Q92685 438 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 KRT35Q92764 455 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 FGF14Q92915 247 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TBC1D31Q96DN5 1066 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 MSANTD3Q96H12 275 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 PBKQ96KB5 322 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 KCTD15Q96SI1 283 aaPredicted RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 SLC2A11Q9BYW1 496 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ZYG11BQ9C0D3 744 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 CATSPERBQ9H7T0 1116 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 DUS2Q9NX74 493 aaKnown RBP11.63□□□□□ -0.55
FOXN3-212ENST00000556541 COX16Q9P0S2 106 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 ZNF212Q9UDV6 495 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 RAD54BQ9Y620 910 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 MYO10Q9HD67 2058 aa11.63□□□□□ -0.55
FOXN3-212ENST00000556541 CTAGE9A4FU28 777 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 EEF2KO00418 725 aaKnown RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CLDN11O75508 207 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 MOCS2O96007 188 aaPredicted RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 ADH1CP00326 375 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 KRT1P04264 644 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CYBBP04839 570 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 GLULP15104 373 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 IL9P15248 144 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 ZFXP17010 805 aaPredicted RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 COL9A1P20849 921 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 IL4RP24394 825 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SLC6A4P31645 630 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CDKN2BP42772 138 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SSR1P43307 286 aaKnown RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 MAPKAPK2P49137 400 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CDH4P55283 916 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CDH6P55285 790 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 ZP2Q05996 745 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 NR1H3Q13133 447 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CA9Q16790 459 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 KCNT1Q5JUK3 1230 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 RFX8Q6ZV50 586 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SETD3Q86TU7 594 aaPredicted RBP11.62□□□□□ -0.55
FOXN3-212ENST00000556541 NLRP14Q86W24 1093 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 YAF2Q8IY57 180 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 RASGEF1CQ8N431 466 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 KCTD6Q8NC69 237 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 IRF7Q92985 503 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 CSPG4P5Q96PW8 444 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 WDR24Q96S15 920 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SLC2A4RGQ9NR83 387 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 SPHK2Q9NRA0 654 aa11.62□□□□□ -0.55
FOXN3-212ENST00000556541 TMEM248Q9NWD8 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms