RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FBXL16Q8N461 479 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SRFBP1Q8NEF9 429 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 TMIEQ8NEW7 156 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SLC24A4Q8NFF2 622 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 AGAP11Q8TF27 550 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SCFD2Q8WU76 684 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 NAT14Q8WUY8 206 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 DEPDC1BQ8WUY9 529 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 RAPGEF4Q8WZA2 1011 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ATG4CQ96DT6 458 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ERLEC1Q96DZ1 483 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 EDC3Q96F86 508 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 B3GALT6Q96L58 329 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CCDC43Q96MW1 224 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 BARD1Q99728 777 aaKnown RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 ACAT2Q9BWD1 397 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SLC26A6Q9BXS9 759 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 GPR61Q9BZJ8 451 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 TMEM60Q9H2L4 133 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SLITRK6Q9H5Y7 841 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ZNF287Q9HBT7 754 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ZC4H2Q9NQZ6 224 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 NSMCE4AQ9NXX6 385 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SIRPGQ9P1W8 387 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 UVRAGQ9P2Y5 699 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 GAB2Q9UQC2 676 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 DTX4Q9Y2E6 619 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 COQ6Q9Y2Z9 468 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 CSNK1G3Q9Y6M4 447 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 ZFP37Q9Y6Q3 630 aaPredicted RBP6.38□□□□□ -1.39
TDP1-215ENST00000556498 MAPKBP1O60336 1514 aa6.38□□□□□ -1.39
TDP1-215ENST00000556498 SAMD9Q5K651 1589 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PCDH11XQ9BZA7 1347 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PCDH11YQ9BZA8 1340 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 FUOMA2VDF0 154 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TCP11X1B4DZS4 312 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 F8W8V4 182 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 LAD1O00515 517 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TRAPPC3O43617 180 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SERPINI2O75830 405 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 RBBP9O75884 186 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 GDF11O95390 407 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PFKMP08237 780 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SELLP14151 372 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PHKG2P15735 406 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 POLR2BP30876 1174 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 ACSL1P33121 698 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 BMI1P35226 326 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 HOXD13P35453 343 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 ALDH3A2P51648 485 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 COPB1P53618 953 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 PSMD4P55036 377 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 ZNF280AP59817 542 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 STX1BP61266 288 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 RPL10AP62906 217 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 PRAMEP78395 509 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 LRMPQ12912 555 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 EFTUD2Q15029 972 aaKnown RBP eCLIP6.37□□□□□ -1.39
TDP1-215ENST00000556498 HERC3Q15034 1050 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SLC39A14Q15043 492 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PFKFB3Q16875 520 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 ABCB5Q2M3G0 1257 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TCHHL1Q5QJ38 904 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 SAPCD1Q5SSQ6 148 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TMEM63BQ5T3F8 832 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 OVOS1Q6IE37 1185 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 KLHL35Q6PF15 583 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 LRRC6Q86X45 466 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SLFN12Q8IYM2 578 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 KIAA0319LQ8IZA0 1049 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 MAML2Q8IZL2 1156 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 CACNA2D3Q8IZS8 1091 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 CLEC4FQ8N1N0 589 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PYROXD2Q8N2H3 581 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TCAIMQ8N3R3 496 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 CSGALNACT2Q8N6G5 542 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 MINDY2Q8NBR6 621 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 GAB3Q8WWW8 586 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 DNAJC9Q8WXX5 260 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SUCLG2Q96I99 432 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 FAM111AQ96PZ2 611 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 RAB3IPQ96QF0 476 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 NUP88Q99567 741 aaPredicted RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 DDX23Q9BUQ8 820 aaKnown RBP6.37□□□□□ -1.39
TDP1-215ENST00000556498 NUP85Q9BW27 656 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TRIM2Q9C040 744 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 DCLK3Q9C098 648 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 GHITMQ9H3K2 345 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 CUEDC2Q9H467 287 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SYNDIG1Q9H7V2 258 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TBC1D23Q9NUY8 699 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 SELENONQ9NZV5 590 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 NYAP2Q9P242 653 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PRKAG3Q9UGI9 489 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 IL19Q9UHD0 177 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 RPS6KA6Q9UK32 745 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms