RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 AGR3Q8TD06 166 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ACSF2Q96CM8 615 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 HIC2Q96JB3 615 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SLITRK1Q96PX8 696 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TINF2Q9BSI4 451 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TSEN34Q9BSV6 310 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LHX5Q9H2C1 402 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TPK1Q9H3S4 243 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ASB7Q9H672 318 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PCDHGB3Q9Y5G1 929 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 A0A1W2PQ67 120 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SH3D21A4FU49 640 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TSC22D2O75157 780 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 KRT75O95678 551 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CALB1P05937 261 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 RARGP13631 454 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CYP3A5P20815 502 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 KLRC2P26717 231 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 IL1R2P27930 398 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LSP1P33241 339 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 IFFO1Q0D2I5 559 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PPA1Q15181 289 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CYTH1Q15438 398 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF667Q5HYK9 610 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 RASIP1Q5U651 963 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SPRYD7Q5W111 196 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CHADLQ6NUI6 762 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 MFSD7Q6UXD7 560 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 DQX1Q8TE96 717 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 STK32AQ8WU08 396 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LENG1Q96BZ8 264 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TNIP3Q96KP6 325 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PWWP2AQ96N64 755 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 DDX50Q9BQ39 737 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 AIFM2Q9BRQ8 373 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 VPS11Q9H270 941 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ADAM7Q9H2U9 754 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ADAMTS10Q9H324 1103 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 NTN4Q9HB63 628 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CDHR5Q9HBB8 845 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 FLRT1Q9NZU1 646 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GMIPQ9P107 970 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 WHRNQ9P202 907 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SNX6Q9UNH7 406 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TNFRSF10AO00220 468 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GPR32O75388 356 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LRCH4O75427 683 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ERBB2P04626 1255 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 POU2F1P14859 743 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ACAT1P24752 427 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GJC1P36383 396 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TRIM23P36406 574 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MDH1P40925 334 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GPD2P43304 727 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PPARDQ03181 441 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PTPN11Q06124 597 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 INCA1Q0VD86 236 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ACVR2BQ13705 512 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 VEPH1Q14D04 833 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TRIP13Q15645 432 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 AGBL2Q5U5Z8 902 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SMYD5Q6GMV2 418 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TRNP1Q6NT89 227 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DNAJC24Q6P3W2 148 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DPF3Q92784 378 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PIWIL1Q96J94 861 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CGREF1Q99674 301 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ZBED2Q9BTP6 218 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DDX23Q9BUQ8 820 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CDC42EP4Q9H3Q1 356 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ABHD16BQ9H3Z7 469 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CIDEBQ9UHD4 219 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DPP7Q9UHL4 492 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GNEQ9Y223 722 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 hCG_1818297A0A087WSY0 165 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 EIF4E1BA6NMX2 242 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PPEF2O14830 753 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DGKIO75912 1065 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 F2P00734 622 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PAEPP09466 180 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CDKN2BP42772 138 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CCR3P51677 355 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MAGOHP61326 146 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LACTBP83111 547 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ROR1Q01973 937 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 E2F2Q14209 437 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 KIZQ2M2Z5 673 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 Q3ZCU0 254 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LRRC38Q5VT99 294 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 KLC3Q6P597 504 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CYP4V2Q6ZWL3 525 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 METTL3Q86U44 580 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ERICH1Q86X53 443 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PALM2Q8IXS6 379 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 EMC1Q8N766 993 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 BCAS4Q8TDM0 211 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms