RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 LGI2Q8N0V4 545 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 WFDC5Q8TCV5 224 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 HMGB4Q8WW32 186 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 RNF34Q969K3 372 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 MYEOVQ96EZ4 313 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PGAP3Q96FM1 320 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PCDHB18PQ96TA0 734 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 C11orf70Q9BRQ4 267 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 TPSD1Q9BZJ3 242 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 CIPCQ9C0C6 399 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 CD248Q9HCU0 757 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PIGVQ9NUD9 493 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 ABCB8Q9NUT2 735 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 THAP10Q9P2Z0 257 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 GGA2Q9UJY4 613 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 TMEM59LQ9UK28 342 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 DMXL1Q9Y485 3027 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TIMM44O43615 452 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 F9P00740 461 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 CALB1P05937 261 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 IL12RB1P42701 662 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 PTP4A2Q12974 167 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 CDH18Q13634 790 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 STARD3Q14849 445 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 NR1I3Q14994 352 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 LPAL2Q16609 132 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 FIGNQ5HY92 759 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TMEM215Q68D42 235 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TRNP1Q6NT89 227 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 SND1Q7KZF4 910 aaKnown RBP eCLIP11.93□□□□□ -0.51e-12■■□□□ 11.5
SLIRP-206ENST00000556375 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 CCDC117Q8IWD4 279 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 OLIG1Q8TAK6 271 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 FIBINQ8TAL6 211 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 AGPAT1Q99943 283 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 ADAM33Q9BZ11 813 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 SEPT11Q9NVA2 429 aaKnown RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 ARHGEF38Q9NXL2 777 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 STIM2Q9P246 746 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 STON1Q9Y6Q2 735 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
SLIRP-206ENST00000556375 NUP205Q92621 2012 aa11.93□□□□□ -0.5
SLIRP-206ENST00000556375 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 DOCK4Q8N1I0 1966 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 A0A1B0GVM2 712 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 TCAF2A6NFQ2 919 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 LRP3O75074 770 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 RETP07949 1114 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 GABRG2P18507 467 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 CD70P32970 193 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
SLIRP-206ENST00000556375 PBX1P40424 430 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 CXCR3P49682 368 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 DEUP1Q05D60 604 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
SLIRP-206ENST00000556375 LMAN2Q12907 356 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ZNF234Q14588 700 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ELF2Q15723 593 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ASIC2Q16515 512 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 FUT11Q495W5 492 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 PLK5Q496M5 336 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 KIAA1211LQ6NV74 962 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 MON1BQ7L1V2 547 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 IRF2BP2Q7Z5L9 587 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ADIPOR2Q86V24 386 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 KBTBD6Q86V97 674 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 CFAP52Q8N1V2 620 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 CARNMT1Q8N4J0 409 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 DCLK2Q8N568 766 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 SORCS1Q8WY21 1168 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ZC3H10Q96K80 434 aaKnown RBP11.92□□□□□ -0.5
SLIRP-206ENST00000556375 LMLNQ96KR4 655 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 SPACA7Q96KW9 195 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 TBCBQ99426 244 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 ADAM22Q9P0K1 906 aa11.92□□□□□ -0.5
SLIRP-206ENST00000556375 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms