RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CHUKO15111 745 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MSH4O15457 936 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 P4HA2O15460 535 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 TRAPPC3O43617 180 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ECE2O60344 883 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CTNND1O60716 968 aaKnown RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 GAS8O95995 478 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 NDUFB10O96000 172 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 PEX11BO96011 259 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CFBP00751 764 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 AGTP01019 485 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 C4BPAP04003 597 aaKnown RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 HMGCRP04035 888 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MMEP08473 750 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CYP3A4P08684 503 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 PAEPP09466 180 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF888P0CJ79 500 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 GHRP10912 638 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SDHAP31040 664 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SLC8A1P32418 973 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CIITAP33076 1130 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CETN2P41208 172 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MXI1P50539 228 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MFAP3P55082 362 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 INHBEP58166 350 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF280AP59817 542 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MAGOHP61326 146 aaKnown RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 GPC5P78333 572 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 KLRC3Q07444 240 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ACTN3Q08043 901 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 TCP10Q12799 353 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 IFT88Q13099 833 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 PPP2R5CQ13362 524 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 DRAP1Q14919 205 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGEF6Q15052 776 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGAP44Q17R89 818 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 RNF151Q2KHN1 245 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 WDR72Q3MJ13 1102 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MTERF2Q49AM1 385 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 EMC10Q5UCC4 262 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 YOD1Q5VVQ6 348 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 FAM109BQ6ICB4 259 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CDC42EP5Q6NZY7 148 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC174Q6PII3 467 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 IRF2BP2Q7Z5L9 587 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SLFN11Q7Z7L1 901 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 FAM160B2Q86V87 743 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 TPH2Q8IWU9 490 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC197Q8NCU1 140 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 BBOF1Q8ND07 529 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SLC35C1Q96A29 364 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MAGOHBQ96A72 148 aaKnown RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CHMP6Q96FZ7 201 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 HES6Q96HZ4 224 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 DYDC2Q96IM9 177 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 FAM81BQ96LP2 452 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 GNRHR2Q96P88 292 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 LRRC37BQ96QE4 947 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ACCSQ96QU6 501 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 UIMC1Q96RL1 719 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 AGPAT1Q99943 283 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ZSWIM1Q9BR11 485 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 TRIM51Q9BSJ1 452 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MENTQ9BUN1 341 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CD244Q9BZW8 370 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 WNT8AQ9H1J5 351 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 DDX4Q9NQI0 724 aaKnown RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 AGPAT3Q9NRZ7 376 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CATSPERZQ9NTU4 200 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 BTBD7Q9P203 1132 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 POLLQ9UGP5 575 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 AMACRQ9UHK6 382 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 TTC7AQ9ULT0 858 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 NR2E1Q9Y466 385 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 CTDP1Q9Y5B0 961 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-241ENST00000556374 SIPA1L1O43166 1804 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 A0A0G2JNJ9 132 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 TLDC2A0PJX2 215 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 CFAP73A6NFT4 308 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 SMIM23A6NLE4 172 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 RSPH10B2B2RC85 870 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 MYO1FO00160 1098 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 MEIS2O14770 477 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 DKC1O60832 514 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATXN3-241ENST00000556374 RTN2O75298 545 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 PPFIA2O75334 1257 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 ENTPD3O75355 529 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 GJB1P08034 283 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 GSTA1P08263 222 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 VIMP08670 466 aaKnown RBP4.64□□□□□ -1.67
ATXN3-241ENST00000556374 NUDT17P0C025 328 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 RSPH10BP0C881 870 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 TRIM49P0CI25 452 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 TRIM49CP0CI26 452 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 ACRV1P26436 265 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 HNRNPH1P31943 449 aaKnown RBP4.64□□□□□ -1.67
ATXN3-241ENST00000556374 ABCD1P33897 745 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 FNTAP49354 379 aa4.64□□□□□ -1.67
ATXN3-241ENST00000556374 VAMP7P51809 220 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms