RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TSPAN3O60637 253 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 NDUFS2O75306 463 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF217O75362 1048 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 PENKP01210 267 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 VDRP11473 427 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ENGP17813 658 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 TBXAS1P24557 533 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 FMO5P49326 533 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 HARS2P49590 506 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 RGS7P49802 495 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 MFAP3P55082 362 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 STX17P56962 302 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SHC2P98077 582 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ARID5AQ03989 594 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF33AQ06730 810 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CETN1Q12798 172 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 LMAN2Q12907 356 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 STARD3Q14849 445 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ARID5BQ14865 1188 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 GEN1Q17RS7 908 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 COBLL1Q53SF7 1204 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SPDYCQ5MJ68 293 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SH3PXD2AQ5TCZ1 1133 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 FYB2Q5VWT5 728 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 BSPRYQ5W0U4 402 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 PM20D1Q6GTS8 502 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CACUL1Q86Y37 369 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ZC3H3Q8IXZ2 948 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 RGL4Q8IZJ4 473 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 PPM1KQ8N3J5 372 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SPATA20Q8TB22 786 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 UCMAQ8WVF2 138 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 UBXN4Q92575 508 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 PLD4Q96BZ4 506 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 MRRFQ96E11 262 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 P2RY11Q96G91 374 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 DHTKD1Q96HY7 919 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 MRGPRX1Q96LB2 322 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 HSPA12BQ96MM6 686 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 TIGD1Q96MW7 591 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 NT5C1BQ96P26 610 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 GABRG3Q99928 467 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 GTPBP4Q9BZE4 634 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CIPCQ9C0C6 399 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 FAM124BQ9H5Z6 455 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 METTL14Q9HCE5 456 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CD93Q9NPY3 652 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 FSCN3Q9NQT6 498 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 OLA1Q9NTK5 396 aaKnown RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 EVLQ9UI08 416 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 PILRBQ9UKJ0 227 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 MAN1B1Q9UKM7 699 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 STON1Q9Y6Q2 735 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 BPTFQ12830 3046 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SMG1Q96Q15 3661 aaKnown RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 YJEFN3A6XGL0 299 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 E7ENQ6 273 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 M0QYV0 167 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 O00370 1275 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 GFRA2O00451 464 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 MSI1O43347 362 aaKnown RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CALCAP01258 141 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SETSIPP0DME0 302 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 PTMSP20962 102 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 PPP1R2P41236 205 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 DPP6P42658 865 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 IL12RB1P42701 662 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 GFPT1Q06210 699 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF234Q14588 700 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 DUOXA1Q1HG43 343 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 FUT11Q495W5 492 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SERPINA13PQ6UXR4 307 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 RRAGAQ7L523 313 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 BHLHA9Q7RTU4 235 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 ANKS1BQ7Z6G8 1248 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CREBRFQ8IUR6 639 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SLC41A1Q8IVJ1 513 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 HDDC3Q8N4P3 179 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 TRIML1Q8N9V2 468 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 DEFB124Q8NES8 71 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 NELFBQ8WX92 580 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SORCS1Q8WY21 1168 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 TFAP2BQ92481 460 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 GOLGA1Q92805 767 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 KAT5Q92993 513 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CEP63Q96MT8 703 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CD248Q9HCU0 757 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 ABCC13Q9NSE7 274 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 LMBRD1Q9NUN5 540 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 ELOVL2Q9NXB9 296 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 KIAA1522Q9P206 1035 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 FBXO10Q9UK96 956 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 KIAA1257Q9ULG3 409 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 CLEC4EQ9ULY5 219 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms