RNA–Protein interactions for RNA: ENST00000556007.6

TIMM9-208, Transcript of translocase of inner mitochondrial membrane 9, human

TSL 3 BASIC

Gene TIMM9, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM9-208	ENST00000556007	DTNA	Q9Y4J8	743 aa		4.26	□□□□□ -1.73
TIMM9-208	ENST00000556007	TMEM272	A0A1B0GTI8	110 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	NPC1	O15118	1278 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	UGDH	O60701	494 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	FGF18	O76093	207 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	WNT1	P04628	370 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	TM4SF4	P48230	202 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	NEK3	P51956	506 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	PGGT1B	P53609	377 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	PGM5	Q15124	567 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	C10orf62	Q5T681	223 aa	Predicted RBP	4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	ASPHD1	Q5U4P2	390 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	LIPM	Q5VYY2	423 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	ISM2	Q6H9L7	571 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	C16orf89	Q6UX73	402 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	C11orf96	Q7Z7L8	435 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	DPP9	Q86TI2	863 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	FAM47B	Q8NA70	645 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	OR52N4	Q8NGI2	321 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	B4GALNT2	Q8NHY0	566 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	NAA15	Q9BXJ9	866 aa	Known RBP	4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	HIPK2	Q9H2X6	1198 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	FZD3	Q9NPG1	666 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	NECTIN3	Q9NQS3	549 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	COG5	Q9UP83	839 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007	B3GNT3	Q9Y2A9	372 aa		4.25	□□□□□ -1.73
TIMM9-208	ENST00000556007		A0A1W2PPC1	479 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	PPP6R2	O75170	966 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	NTSR2	O95665	410 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	GLP2R	O95838	553 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	HOXB2	P14652	356 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	CBFB	Q13951	182 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	SLC35G1	Q2M3R5	365 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	SMTNL2	Q2TAL5	461 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	PRTG	Q2VWP7	1150 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	ANXA2R	Q3ZCQ2	193 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	ARHGAP15	Q53QZ3	475 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	COBLL1	Q53SF7	1204 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	UBAP2	Q5T6F2	1119 aa	Known RBP	4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	DHRS13	Q6UX07	377 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	EXD3	Q8N9H8	876 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	PJA1	Q8NG27	643 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	NPIPB3	Q92617	1050 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	TBCB	Q99426	244 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	EIF3C	Q99613	913 aa	Known RBP	4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	FSCN3	Q9NQT6	498 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	HELLS	Q9NRZ9	838 aa		4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	IPO11	Q9UI26	975 aa	Known RBP	4.24	□□□□□ -1.73
TIMM9-208	ENST00000556007	FAM234B	A2RU67	622 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	IFRD1	O00458	451 aa	Predicted RBP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	APAF1	O14727	1248 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	SYF2	O95926	243 aa	Known RBP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	ITGA5	P08648	1049 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	IGFBP2	P18065	325 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	PMS2P11	Q13670	270 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	CSHL1	Q14406	222 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	DHX8	Q14562	1220 aa	Known RBP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	KIAA1755	Q5JYT7	1200 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	TRAPPC11	Q7Z392	1133 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	RASGRP3	Q8IV61	690 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	GPR78	Q96P69	363 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	TM7SF3	Q9NS93	570 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	FBXO28	Q9NVF7	368 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	WWOX	Q9NZC7	414 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	TAGLN3	Q9UI15	199 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	FAM50B	Q9Y247	325 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	PCDHB7	Q9Y5E2	793 aa		4.23	□□□□□ -1.73
TIMM9-208	ENST00000556007	ANO9	A1A5B4	782 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	PRR23D1	E9PI22	279 aa	Predicted RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	HNRNPDL	O14979	420 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	PMM2	O15305	246 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	TAF5L	O75529	589 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	SRGAP2B	P0DMP2	458 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	HARS	P12081	509 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	TGM2	P21980	687 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	CDKN2A	P42771	156 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	FAM209B	Q5JX69	171 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	B4GALNT4	Q76KP1	1039 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	KRT27	Q7Z3Y8	459 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	ADHFE1	Q8IWW8	467 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	DDIAS	Q8IXT1	998 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	TXLNB	Q8N3L3	684 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	ACRBP	Q8NEB7	543 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	SRFBP1	Q8NEF9	429 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	THOC3	Q96J01	351 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	FAR2	Q96K12	515 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	ZNF347	Q96SE7	839 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	HTATIP2	Q9BUP3	242 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	MRPL44	Q9H9J2	332 aa	Known RBP	4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	PRDM16	Q9HAZ2	1276 aa		4.22	□□□□□ -1.73
TIMM9-208	ENST00000556007	LOC105369274	A0A096LPK9	316 aa		4.21	□□□□□ -1.74
TIMM9-208	ENST00000556007	LOC102723532	A0A0G2JNH3	316 aa		4.21	□□□□□ -1.74
TIMM9-208	ENST00000556007	PNMA6E	A0A0J9YXQ4	647 aa		4.21	□□□□□ -1.74
TIMM9-208	ENST00000556007		J3KTA2	159 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms