RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 EPS8L2Q9H6S3 715 aa4.36□□□□□ -1.71
SCFD1-216ENST00000555550 PRDM16Q9HAZ2 1276 aa4.36□□□□□ -1.71
SCFD1-216ENST00000555550 TMEM8AQ9HCN3 771 aa4.36□□□□□ -1.71
SCFD1-216ENST00000555550 COG5Q9UP83 839 aa4.36□□□□□ -1.71
SCFD1-216ENST00000555550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 OR2W5A6NFC9 320 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 RASA4BC9J798 803 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 CTIFO43310 598 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 RASA4O43374 803 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 NDUFB8O95169 186 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 SYF2O95926 243 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ENO1P06733 434 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 AKR1A1P14550 325 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 AK2P54819 239 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 B4GALNT1Q00973 533 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 PICALMQ13492 652 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 IZUMO3Q5VZ72 239 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ZNF324BQ6AW86 544 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 OR2C3Q8N628 320 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ASB12Q8WXK4 309 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 P2RY11Q96G91 374 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ZNF845Q96IR2 970 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 TNIP3Q96KP6 325 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 CCDC138Q96M89 665 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 ELOVL1Q9BW60 279 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 MOV10Q9HCE1 1003 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 HELLSQ9NRZ9 838 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 RXFP3Q9NSD7 469 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 GEMIN8Q9NWZ8 242 aaKnown RBP4.35□□□□□ -1.71
SCFD1-216ENST00000555550 SLC8A2Q9UPR5 921 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 PCDHGB2Q9Y5G2 931 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
SCFD1-216ENST00000555550 TMEM272A0A1B0GTI8 110 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 HNRNPDLO14979 420 aaKnown RBP4.34□□□□□ -1.71
SCFD1-216ENST00000555550 NPC1O15118 1278 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 ZC3H11AO75152 810 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCFD1-216ENST00000555550 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 IL31Q6EBC2 164 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 NR2C2APQ86WQ0 139 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 TMPRSS12Q86WS5 348 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 RHPN2Q8IUC4 686 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 GJA10Q969M2 543 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 FAR2Q96K12 515 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 GPR78Q96P69 363 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 MYD88Q99836 296 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 ABHD14AQ9BUJ0 271 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 HTATIP2Q9BUP3 242 aa4.34□□□□□ -1.71
SCFD1-216ENST00000555550 UBE2J1Q9Y385 318 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-216ENST00000555550 SPATA31A5Q5VU36 1347 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 SPATA31A7Q8IWB4 1347 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 A0A1W2PPC1 479 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 DPPA5A6NC42 116 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 PRC1O43663 620 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 EPN2O95208 641 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 MYL1P05976 194 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ARRB2P32121 409 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 TM4SF4P48230 202 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 SOX2P48431 317 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ZNF84P51523 738 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 NEK3P51956 506 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 PPATQ06203 517 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 RAB30Q15771 203 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ARL6IP4Q66PJ3 421 aaKnown RBP4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ANKRD40Q6AI12 368 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 CAPRIN2Q6IMN6 1127 aaKnown RBP4.33□□□□□ -1.72
SCFD1-216ENST00000555550 MSANTD2Q6P1R3 559 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 C16orf89Q6UX73 402 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 LAS2Q8IYD9 372 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 SRFBP1Q8NEF9 429 aaKnown RBP4.33□□□□□ -1.72
SCFD1-216ENST00000555550 SLC22A17Q8WUG5 538 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 NR4A3Q92570 626 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 MUL1Q969V5 352 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 FAM84BQ96KN1 310 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-216ENST00000555550 GDF15Q99988 308 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 MYLK2Q9H1R3 596 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 NECTIN3Q9NQS3 549 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 TM7SF3Q9NS93 570 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 DECR2Q9NUI1 292 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ANAPC4Q9UJX5 808 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 CA14Q9ULX7 337 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 PHTF1Q9UMS5 762 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 B3GNT3Q9Y2A9 372 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 PCDHB7Q9Y5E2 793 aa4.33□□□□□ -1.72
SCFD1-216ENST00000555550 ZNF335Q9H4Z2 1342 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-216ENST00000555550 M0QZQ0 153 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 PRPF4O43172 522 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCFD1-216ENST00000555550 TAF5LO75529 589 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 ITGA5P08648 1049 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 HOXA11P31270 313 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-216ENST00000555550 AKT1P31749 480 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 CIITAP33076 1130 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 HSPA7P48741 367 aa4.32□□□□□ -1.72
SCFD1-216ENST00000555550 ALDH7A1P49419 539 aaKnown RBP4.32□□□□□ -1.72
SCFD1-216ENST00000555550 ALDH18A1P54886 795 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms